RNA id: trnak-uuu-133


Basic Information

Item Value
RNA id trnak-uuu-133
length 73
RNA type mRNA
GC content 0.53
exon number 1
gene id trnak-uuu-133
representative True

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 35134103 ~ 35134175 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

gcccagatagctcagtcggtagagcatcagacttttaatctgagggtccagggttcaagtccctgtttgggcg

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU2437757 lncRNA upstream 18939 35114958 ~ 35115164 (+) True G2131978
TU2437752 lncRNA upstream 23086 35110780 ~ 35111017 (+) True G2131973
TU2437723 lncRNA upstream 33578 35100204 ~ 35100525 (+) True G2131944
TU2437722 lncRNA upstream 36768 35097083 ~ 35097335 (+) True G2131943
TU2437712 lncRNA upstream 59267 35073891 ~ 35074836 (+) True G2131934
TU2437784 lncRNA downstream 55681 35189856 ~ 35241695 (+) False G2132004
TU2437785 lncRNA downstream 65046 35199221 ~ 35241695 (+) True G2132004
TU2437787 lncRNA downstream 111114 35245289 ~ 35293756 (+) True G2132005
TU2437803 lncRNA downstream 200731 35334906 ~ 35335164 (+) True G2132015
TU2437805 lncRNA downstream 222249 35356424 ~ 35356694 (+) True G2132017
trnak-uuu-132 mRNA upstream 1243 35132788 ~ 35132860 (+) True trnak-uuu-132
XM_036966464.1 mRNA upstream 45992 35079498 ~ 35088111 (+) True LOC110509084
XM_021590040.2 mRNA upstream 194775 34936526 ~ 34939328 (+) True LOC110509083
XM_021590036.2 mRNA upstream 230685 34898527 ~ 34903418 (+) True si:ch211-252f13.5
XM_036966160.1 mRNA upstream 266780 34824972 ~ 34867323 (+) False LOC110509073
trnak-uuu-134 mRNA downstream 1487 35135662 ~ 35135734 (+) True trnak-uuu-134
trnak-uuu-135 mRNA downstream 3046 35137221 ~ 35137293 (+) True trnak-uuu-135
trnak-uuu-136 mRNA downstream 4350 35138525 ~ 35138597 (+) True trnak-uuu-136
trnak-uuu-137 mRNA downstream 5654 35139829 ~ 35139901 (+) True trnak-uuu-137
trnak-uuu-138 mRNA downstream 6958 35141133 ~ 35141205 (+) True trnak-uuu-138
TU2437711 other upstream 41069 35091699 ~ 35093034 (+) True G2131933
TU2437109 other upstream 350685 34702206 ~ 34783418 (+) True G2131426
TU2437076 other upstream 446463 34687271 ~ 34687640 (+) True G2131416
TU2437020 other upstream 529150 34603485 ~ 34604953 (+) True G2131383
TU2436600 other upstream 760093 34370861 ~ 34374010 (+) True LOC110508236
TU2438124 other downstream 565671 35699846 ~ 35700235 (+) True G2132291
TU2438299 other downstream 839264 35973439 ~ 35975132 (+) True LOC110508289
TU2438402 other downstream 1204919 36339094 ~ 36364994 (+) True G2132519
TU2438499 other downstream 1231381 36365556 ~ 36369967 (+) True G2132611
TU2438557 other downstream 1388579 36522754 ~ 36525415 (+) True LOC110509112