RNA id: trnaw-cca-91



Basic Information


Item Value
RNA id trnaw-cca-91
length 72
RNA type mRNA
GC content 0.57
exon number 1
gene id trnaw-cca-91
representative True

Chromosome Information


Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 35190205 ~ 35190276 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


gacctcgtggcgcaatggtagcgcgtctgactccagatcagaaggttgcgtgttcaactcacgtcgtggtca

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU2437769 lncRNA downstream 64482 35123400 ~ 35125723 (-) True G2131990
TU2437755 lncRNA downstream 76268 35113693 ~ 35113937 (-) True G2131976
TU2437753 lncRNA downstream 77756 35111996 ~ 35112449 (-) True G2131974
TU2437729 lncRNA downstream 121066 35068518 ~ 35069139 (-) True G2131950
TU2437681 lncRNA downstream 147527 35041966 ~ 35042678 (-) True G2131906
TU2437798 lncRNA upstream 66411 35256687 ~ 35257074 (-) True G2132010
TU2437804 lncRNA upstream 144602 35334878 ~ 35335159 (-) True G2132016
TU2437806 lncRNA upstream 166148 35356424 ~ 35356686 (-) True G2132018
TU2437876 lncRNA upstream 195648 35385924 ~ 35386152 (-) True G2132074
TU2437885 lncRNA upstream 206741 35397017 ~ 35397255 (-) True G2132083
trnaw-cca-90 mRNA downstream 1491 35188643 ~ 35188714 (-) True trnaw-cca-90
trnaw-cca-89 mRNA downstream 3050 35187083 ~ 35187155 (-) True trnaw-cca-89
trnaw-cca-88 mRNA downstream 11524 35178610 ~ 35178681 (-) True trnaw-cca-88
trnaw-cca-87 mRNA downstream 14121 35176013 ~ 35176084 (-) True trnaw-cca-87
trnaw-cca-86 mRNA downstream 15425 35174709 ~ 35174780 (-) True trnaw-cca-86
trnaw-cca-92 mRNA upstream 4614 35194890 ~ 35194961 (-) True trnaw-cca-92
trnaw-cca-93 mRNA upstream 7729 35198005 ~ 35198076 (-) True trnaw-cca-93
trnaw-cca-94 mRNA upstream 9293 35199569 ~ 35199642 (-) True trnaw-cca-94
trnaw-cca-95 mRNA upstream 10853 35201129 ~ 35201201 (-) True trnaw-cca-95
trnaw-cca-96 mRNA upstream 12419 35202695 ~ 35202767 (-) True trnaw-cca-96
TU2437347 other downstream 672076 34516522 ~ 34518129 (-) False G2131641
TU2437349 other downstream 672076 34516522 ~ 34518129 (-) True G2131641
TU2437325 other downstream 704029 34485869 ~ 34486176 (-) True G2131621
TU2436347 other downstream 1131935 34044690 ~ 34058270 (-) True LOC110509052
TU2436338 other downstream 1147640 34041569 ~ 34042565 (-) False LOC110509052
TU2438804 other upstream 815213 36005489 ~ 36017832 (-) False lyrm4
TU2438803 other upstream 825786 36016062 ~ 36017832 (-) True lyrm4
TU2438849 other upstream 833504 36023780 ~ 36025201 (-) False LOC118944844
TU2438850 other upstream 833514 36023790 ~ 36025201 (-) True LOC118944844
TU2438948 other upstream 1033937 36224213 ~ 36225379 (-) True G2132971