RNA id: trnaw-cca-129


Basic Information

Item Value
RNA id trnaw-cca-129
length 72
RNA type mRNA
GC content 0.56
exon number 1
gene id trnaw-cca-129
representative True

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 35253468 ~ 35253539 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

gacctcgtggcgcaatggtagcgtgtctgactccagatcagaaggttgcgtgttcaactcacgtcgtggtca

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU2437769 lncRNA downstream 127745 35123400 ~ 35125723 (-) True G2131990
TU2437755 lncRNA downstream 139531 35113693 ~ 35113937 (-) True G2131976
TU2437753 lncRNA downstream 141019 35111996 ~ 35112449 (-) True G2131974
TU2437729 lncRNA downstream 184329 35068518 ~ 35069139 (-) True G2131950
TU2437681 lncRNA downstream 210790 35041966 ~ 35042678 (-) True G2131906
TU2437798 lncRNA upstream 3148 35256687 ~ 35257074 (-) True G2132010
TU2437804 lncRNA upstream 81339 35334878 ~ 35335159 (-) True G2132016
TU2437806 lncRNA upstream 102885 35356424 ~ 35356686 (-) True G2132018
TU2437876 lncRNA upstream 132385 35385924 ~ 35386152 (-) True G2132074
TU2437885 lncRNA upstream 143478 35397017 ~ 35397255 (-) True G2132083
trnaw-cca-128 mRNA downstream 1226 35252171 ~ 35252242 (-) True trnaw-cca-128
trnaw-cca-127 mRNA downstream 2530 35250867 ~ 35250938 (-) True trnaw-cca-127
trnaw-cca-126 mRNA downstream 5129 35248268 ~ 35248339 (-) True trnaw-cca-126
trnaw-cca-125 mRNA downstream 6433 35246964 ~ 35247035 (-) True trnaw-cca-125
trnaw-cca-124 mRNA downstream 7737 35245660 ~ 35245731 (-) True trnaw-cca-124
trnaw-cca-130 mRNA upstream 1226 35254765 ~ 35254836 (-) True trnaw-cca-130
trnaw-cca-131 mRNA upstream 2523 35256062 ~ 35256133 (-) True trnaw-cca-131
trnaw-cca-132 mRNA upstream 4454 35257993 ~ 35258064 (-) True trnaw-cca-132
trnaw-cca-133 mRNA upstream 5749 35259288 ~ 35259359 (-) True trnaw-cca-133
trnaw-cca-134 mRNA upstream 7044 35260583 ~ 35260654 (-) True trnaw-cca-134
TU2437347 other downstream 735339 34516522 ~ 34518129 (-) False G2131641
TU2437349 other downstream 735339 34516522 ~ 34518129 (-) True G2131641
TU2437325 other downstream 767292 34485869 ~ 34486176 (-) True G2131621
TU2436347 other downstream 1195198 34044690 ~ 34058270 (-) True LOC110509052
TU2436338 other downstream 1210903 34041569 ~ 34042565 (-) False LOC110509052
TU2438804 other upstream 751950 36005489 ~ 36017832 (-) False lyrm4
TU2438803 other upstream 762523 36016062 ~ 36017832 (-) True lyrm4
TU2438849 other upstream 770241 36023780 ~ 36025201 (-) False LOC118944844
TU2438850 other upstream 770251 36023790 ~ 36025201 (-) True LOC118944844
TU2438948 other upstream 970674 36224213 ~ 36225379 (-) True G2132971