RNA id: trnaw-cca-148


Basic Information

Item Value
RNA id trnaw-cca-148
length 72
RNA type mRNA
GC content 0.56
exon number 1
gene id trnaw-cca-148
representative True

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 35281075 ~ 35281146 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

gacctcgtggcgcaatggtagcgtgtctgactccagatcagaaggttgcgtgttcaactcacgtcgtggtca

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU2437798 lncRNA downstream 24001 35256687 ~ 35257074 (-) True G2132010
TU2437769 lncRNA downstream 155352 35123400 ~ 35125723 (-) True G2131990
TU2437755 lncRNA downstream 167138 35113693 ~ 35113937 (-) True G2131976
TU2437753 lncRNA downstream 168626 35111996 ~ 35112449 (-) True G2131974
TU2437729 lncRNA downstream 211936 35068518 ~ 35069139 (-) True G2131950
TU2437804 lncRNA upstream 53732 35334878 ~ 35335159 (-) True G2132016
TU2437806 lncRNA upstream 75278 35356424 ~ 35356686 (-) True G2132018
TU2437876 lncRNA upstream 104778 35385924 ~ 35386152 (-) True G2132074
TU2437885 lncRNA upstream 115871 35397017 ~ 35397255 (-) True G2132083
TU2437891 lncRNA upstream 126782 35407928 ~ 35408146 (-) True G2132089
trnaw-cca-147 mRNA downstream 1233 35279771 ~ 35279842 (-) True trnaw-cca-147
trnaw-cca-146 mRNA downstream 2791 35278213 ~ 35278284 (-) True trnaw-cca-146
trnaw-cca-145 mRNA downstream 4336 35276668 ~ 35276739 (-) True trnaw-cca-145
trnaw-cca-144 mRNA downstream 5640 35275364 ~ 35275435 (-) True trnaw-cca-144
trnaw-cca-143 mRNA downstream 7199 35273805 ~ 35273876 (-) True trnaw-cca-143
trnaw-cca-149 mRNA upstream 1478 35282624 ~ 35282695 (-) True trnaw-cca-149
trnaw-cca-150 mRNA upstream 3036 35284182 ~ 35284253 (-) True trnaw-cca-150
trnaw-cca-151 mRNA upstream 4340 35285486 ~ 35285557 (-) True trnaw-cca-151
trnaw-cca-152 mRNA upstream 5895 35287041 ~ 35287112 (-) True trnaw-cca-152
trnaw-cca-153 mRNA upstream 7457 35288603 ~ 35288674 (-) True trnaw-cca-153
TU2437347 other downstream 762946 34516522 ~ 34518129 (-) False G2131641
TU2437349 other downstream 762946 34516522 ~ 34518129 (-) True G2131641
TU2437325 other downstream 794899 34485869 ~ 34486176 (-) True G2131621
TU2436347 other downstream 1222805 34044690 ~ 34058270 (-) True LOC110509052
TU2436338 other downstream 1238510 34041569 ~ 34042565 (-) False LOC110509052
TU2438804 other upstream 724343 36005489 ~ 36017832 (-) False lyrm4
TU2438803 other upstream 734916 36016062 ~ 36017832 (-) True lyrm4
TU2438849 other upstream 742634 36023780 ~ 36025201 (-) False LOC118944844
TU2438850 other upstream 742644 36023790 ~ 36025201 (-) True LOC118944844
TU2438948 other upstream 943067 36224213 ~ 36225379 (-) True G2132971