RNA id: XM_021590066.2


Basic Information

Item Value
RNA id XM_021590066.2
length 5790
RNA type mRNA
GC content 0.50
exon number 11
gene id fastk
representative True

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 36192769 ~ 36218674 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

ggcggagagacATGCACATCTTGTCAGTATTTCCATAATCTTTGCTGTAATGAACCAAATGTTGGCATTAGCCGTcaacagaagaagaagaccaaCAAAGTTGCATGCTGGGAAGATGGCCGACACCAGTGCGGCTAGTGAAGAATGAGAGGACGAGAAACCGAATACAGTTCTTGCGGCAAATGTCATCAATCGTTTTAGAACGATTTCCGGTGTAGGTGCGTCCGAGCTACCAGGGAAAATAATATATTGTGTCAGTGTGAATAAGTCAAACGCATTGTCAATAACACCAACCCATATTCGCTCCTGGATAGAGAGAACAGAGCGAGGCGAATTGAAACCTAGGTCAAGACAGTTTGCAAAAAACGGTGTCATTGCAATGGACGTCCATGACCAAAGAATTACAGTATTCCACGATTAACTAGCTAATTTAAATTTGGTAAATTAGTTAAAATGGTCAACCGATATAGTGAACGTTTTAATTGACGGGCTGGCTGTCACTCCTATGTTTCGCTTAACTTCTTGGGAGTGTCACGGTCAGATGACAGACTGACTGTCATTGCTCCCAGTGAGATACTCAACGGCAACACCCATCTGGATATTCCTCTTGCGTTGACAAACATgtGTAGTCTGCATTGCCTCAGCGGTGTACTAGCCTGTGTAGTATGCTGTGGCTGTCCTCCAGCCCAGGCCTCCTGAGCTGCGAAAGCATAATCCCTTCGCCCCTCTGCCAGCGACACGCCTGCCGCCTTAGCGCCCTCGCTCTCGCCCTCGCCGGCATGTACACAACCCGCCTGTACAGCGCagtaggtggtggtggaggaggaaagcCTGGACGCCGGCCGGGCCTGGGGGGTGGAGGTCTGCCCATGCTGGAgaaccacccccaccaccaccctctCCCACCACACCAACATCCCCACCACgtgcctcctccacctcccagCTACCCGCCCATCTACCAGGGGCGCCCTGACCCTCACCGGGGGCCCCACTTTcacagtcaccaccaccaccaccaacactaccATCCCCACCCACACCTGGCCCcgcctccacccctccccccgcATCCCCACTACCAGACACACGCCCACCTGCACCACCACAGCACTGTTGGCGCGGCCGGCAACAACAAGAAGAAGACGTGGAACTTCATCCATGAGAAGATGAGCTACGACACCTTCTTCACCATGAAGAGGCTGATCGAACGCTCGCGGAGAGCGGACGAGGTGCTGCGCTGGGTGACGCAGAACCCAGGCAAGATTTCACACAACCATTACCCCATCGCACTGCAGAAGATCGGCCAGCTACTACAGGCCggggctggaggaggaggagggggcggcGGAGGTGGCTCGGATGCAGCCCTGGTTCCCTCTCCCGTAGTCGGTGGAGGAGAAAGAGTGGAGAATGAAGGTCGACAGATCTTGGAGCACCAGGACTTCCAGACGCTGTGCGACTCCATCGTGAGGGACTGTGCCAAGTTTGACAACTTCAGCATTGTCAACTGCCTGTACGCTGTGGCAGCATTGGGCCTTCCCAGCGACTCGCGGGTAGTGCAGGTGCTGGAGGCTGAGTCCCAATCACGACTGGGCCAGTTTAACCAGAAGGACGTGTCCATGGTGTTCAGCTCCAGCATGAAGCTGCACCCCAGCAGCCAGCACCCGCTCACCGAGGCCTGCCTGGTGGGCTTGGAGAAGAACCTGGAGCGGGAGCGTCACCCGCAGACCCTCTTCCTGCTGCTCTCCTACTACCGCCTCAAGTGGCGCTCGCTGCAATCCAGCGACGCTGCAACGGCCGAGATCGTGGCCAATATACCACCCAACCCGGAACAGCTCCTGGCCAACAGGAAGATCCTCCGACTGGTCAAGCACACACTGGCTAGCGTAAGTGGAGTGCGCGACCAGGAGATGGCGCTGCTGGACGAGATGCTGGCTACTTGCGTACGCGAGGCTAGTAACAAGAGCCTGGAGATCATCTTCAGCTCCCACCTATTCTACCAGAACAGACAGGAGAGGTTTGTGTGCAGCCTGGCTGAGGAGCTGCCTAAAAAAGTGGACAGCATAACCCCATACACCATGGCCCTCATTGCCAAATACATCGCCCGCCACCGGCTCAGAGAGACTCGACTCCTCGACACCATCGCTGATTTCCTGGTCAAGAAGGGAGAATACCTGGATAGCAAGGTAATCCAAAAGCTTGTGTTCCCCTTCAGCCGGATGAGCTACCGGCCGTCCAACGAGGTCCAGTTCTTCTCCAAGCTGGAGGTGGTGCTGGAGCTAAAGGCCCTGAGCTCCCCGCTAGCCACAGTCAACATCCTCATGTCCCTGTTCCAGCTGGGCCACTTCCCTGGCCTGGTGCTGCACAAGGTCTTCTCCACCGCCTTCATCAGCAACGTCACCAACAGCCCTTACGCTCTGATCGTGCGTCGCTACCTGTCTCTGTTGGACGCGGCGGTGGAGCTGGAATACAGGGACTACACCGGTCCACGGCTCCAGGACACGCACAAGGTGCTCATGTTTGACCACGCGCTGACCGCTGACGAGGTCAACCGCAAATACAGCTACAGGGGTCTTGTTGCTGAAGCCCTCAGACAGTTGGTTGGAGAGCATGGATACAAACAAGACGAGGTTCTGGCCCCTGGTTATTACACAGACTTCCTGCTGTGGATTGACAGCTCTGGCCAGGTTCTCCCTATCCAGGCAGGGGCCTCCCTAGGTGTTTCCCACAAAGCCCCAGAGGGATCCGTGGCTGTGACGGCCCTCGCCTCAGACTTTCAAAAGTTATCCCCCTTCGCCCCACTAGAGGAAGGGGGGGACCAGCGACCCGTCGGAGGGGACGAGTCGGTGACCCTCCTGCCACACCACATGCAGCGCGGGGAAAACCCTGCCTTGGCCCAGAGGGCCGGCCCTAACGGCGGGGGCCCACTTGACTACAACACTTACTACACGCCTGCTGACTACTACTCCAGCCTGGCCAAGGAGCACTCTCTGGAGAGCCAGGACAGCTCCACGCTCAGCAGCCCTCCCTCTGACAGCCTAGCCCAGCCAATGGCCTCCGGGGTAGGGGGATCCACCACAGCTGCCCCGGTTTCTCTTTTCCAGTTCTCTATTGGGAAGATCCTGGAGGACGAGGGAGGGGTGCAGGTGGGGCCAGGTAATCATGGGCCCGACTGCGAGCTCCCTGTCTTCTATGAGGGGTTGGCCGGGGACGTGGGGCTGCACCCGGCCGATCGAACCGACACCGAGAGGGCAGTGGGGGACCAGCGACAAGTTAAGAGagtggtcatgtCGGTGAATGACAAGTGGCACTACTGTCACAACTCCGAGGTGCTGGTGGGCTCCCGAGCCATGAGGGACCGTCATCTGTTGCTCCTGGGATATGTCATTCTGCAGCTGCCCTATCACGAGCTGGAGAAGCTGAATGGCATAGAGGAGGTGAAGCAGTACCTCCACAAAAAGCTCCTGGAGGTCCCCTTATGACAACAAAagacttgagtgtgtgtgtgtgtgtgtgcgccattgCGACAGGACAGGGGGTTGTTGGTGGGATTGGGAAAAGGGGGTGGTTTGGGGTAGAGAACAAACCCTGGTCAAAGTCTAAAACaagagttttttttgttgttgttgcaatttTGCTCTTGCATTCATCAAAATGGCGCCACGCTATTTGCAACGAGCCATATACCCAGTTGATGACATGTCTAGTATCATGTTGCCATGCTTGGTATCTTGTTATTGTCACTTCACAACCGTTCTTGACCATCTTGCCTACGGACTGTTCTTAGTGTATCACAGTAGCATGACAAAACAGTTGGGTTTTTCTTTTCTATAGTTGTAGTTTTAATCATGGCTTTGTGTGGGGGAATAAGatgtttattataattattatagaGTCATACAGAGATGACAATGTTCTGGTGtttggggaggggagagggggggtaaTTTTCTATTGTTTAACTCCAGTTGTAACGCATGACTGTTCATACAGGACAAACAAACGGGGCTTTCTTCATAGTGTTTTCTAATACTGGTGCACCGTATGTAGACTAATGGACTGTAGGATGTTAATGAGGGATGAACATTTTATAAATCTAGTTTaatgtgtttatatatttttgaatGCTGGAACGGCTTTTCCTGTGTCCAGAACAAAGCAACGCGTAGTGGAAGTCCAACATCAACTTAGTCTCcctctttgttttgtctttggcaCTTCACTTCTGACATTTTAATGAATGACTGTATTCAGAGAGGAGTTTGATTCCTCAAGTGAGTTTCCACCAACTGCATTGACAATGAAACAGGTTTTCCAGGAGGGAATTGCTAGATACCCAGGCCCTCATTTATCTCACTCAATACTGGTGTACGTGGAGATAAATAGTTGCCCATGCAAATCCTACAAACTGTCACATGCATCTTATACATATAAATGTTTTCATTGATAAACGAGAGCCATACTATATTTGTCCTTGTGAACGAGCTTTGCAACCCCGCTTGGAAAATGCCCTCATTCACGGTAACAAAAACTGTATGATTTGGAGATGTAGGAACTGGGCCGTGATAGTTCCTGAAAGAGAAACGCAATGGCAAGTTGCATCACATTTCTGTAGAGATGTAGACCAAATGTGTTCATCTCTTGCAGTGACTTTTTCAAACGCCGTGGCCGTGCACTATGCAACATTGTCTATTTTGAGTCATTTTAAAAAAAGTCAATGTTTCAGCCCCACACTTTTATGCAGAAGATGAATTGTTGTTCAGTGTTTTATATCTTCTGCCTCGGTGGCTCTGAGATTTAATAGGCTAAGATGTTGTGCTCCTACTGCACAGCattactgtagcctacccatactgtcaaatattttaaatAGGCTACCGGTCTATTTACTTTTGAACACATGGTATCCTCATTAGGTATGCAGCAGGAATGAACCAGTTCAGTCAGAAAAGGAGAGCTGTAGGCCTAATAtaacaaaagtaaaataaacataTTAGGCTACATATGCTTCTCTGAGATCTCCTTACTAAATGCATCTGTGTTTTGTTTTAATATTACCATTATAATTATTGTGCCTCAAAACCATCTCCATTTTTCCCCCATAAGAACAATGTGTGCAATACAGTTGATCAACCACCAGACGTACACATGGCCTGAGCTGTACTTGGGAGATACTCAACACCTTCCCgcaaattcaaatgtatttaaaaaataaaaagatatcTTTAAGGGGGAGAAAGTGGCGCATGCGTACATTTGATAAGTGAGGCCCCAGGTTCGTTTAAATGAGAGAATTTGATTGGAAGGTCTGGGTATTGCTATGAAAACATTCTGTTTGTCCTATCAGTGGTATTTGAAATCGTACCCTGACCTAATTTCCGTTTGAATGAGGTGATTTGTGTCACACAGTGAAACATTTCACAATACCACACAAATATGACTCCCATCAGCTTTGTACATGAATGACCCCAAACACTTGAACTGTGTCAGGTAAAGCAGAAATGGCTTATGTGATGTTAATCCACCCCAGTATTACTGGGAACGTTGTCCTTTGTTCTGTTTATGGAGCCTTCCAGATAGAGACCAGGGTAACTGAGTCACCTGTGTGTAATATATGAATGAATGCATTATCATTTGTAAGGATCCATAGGTTGTATACATGTATTATGCACAGGTGGTTGAGTTAGTATTTATTTATTGGtacagaggatgtgtgtgtgtttggggaaaGAAGGatgggaaaagattttattgaaATGTATGGAAAAATATTAAAAGAATGAAAAA

Function

GO:

id name namespace
GO:0004672 protein kinase activity molecular_function

KEGG:

id description
K08290 FASTK; Fas-activated serine/threonine kinase

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU2438946 lncRNA downstream 366 36196849 ~ 36197432 (-) True G2132969
TU2438969 lncRNA downstream 39510 36157228 ~ 36158288 (-) False G2132992
TU2438971 lncRNA downstream 40009 36157228 ~ 36157789 (-) True G2132992
TU2438875 lncRNA downstream 120095 36077476 ~ 36077703 (-) True G2132934
TU2438864 lncRNA downstream 155972 36041534 ~ 36041826 (-) True G2132923
TU2438955 lncRNA upstream 15794 36234468 ~ 36243185 (-) True G2132978
TU2438985 lncRNA upstream 31702 36250376 ~ 36255942 (-) True G2133005
TU2438986 lncRNA upstream 39063 36257737 ~ 36258004 (-) True G2133006
TU2438989 lncRNA upstream 48570 36267244 ~ 36267598 (-) True G2133009
TU2439007 lncRNA upstream 94095 36312769 ~ 36313075 (-) True G2133027
XM_021590064.2 mRNA downstream 133226 36053418 ~ 36064572 (-) True LOC110509100
XM_036966658.1 mRNA downstream 145622 36044041 ~ 36052176 (-) True LOC110509099
XR_005040236.1 mRNA downstream 145623 36044041 ~ 36052175 (-) False LOC110509099
XM_021590063.2 mRNA downstream 145624 36044041 ~ 36052174 (-) False LOC110509099
XM_036966480.1 mRNA downstream 172063 36023714 ~ 36025735 (-) False LOC118944844
XM_036966204.1 mRNA upstream 11381 36230055 ~ 36232160 (-) False LOC118944824
XM_036966205.1 mRNA upstream 11844 36230518 ~ 36232160 (-) True LOC118944824
XM_036966202.1 mRNA upstream 16824 36235498 ~ 36240339 (-) False LOC118936612
XM_036966200.1 mRNA upstream 19973 36238647 ~ 36240335 (-) False LOC118936612
XR_005040206.1 mRNA upstream 19989 36238663 ~ 36240326 (-) False LOC118936612
TU2438849 other downstream 172597 36023780 ~ 36025201 (-) False LOC118944844
TU2438850 other downstream 172597 36023790 ~ 36025201 (-) True LOC118944844
TU2438804 other downstream 179966 36005489 ~ 36017832 (-) False lyrm4
TU2438803 other downstream 179966 36016062 ~ 36017832 (-) True lyrm4
TU2437349 other downstream 1679669 34516522 ~ 34518129 (-) True G2131641
TU2438948 other upstream 5539 36224213 ~ 36225379 (-) True G2132971
TU2438933 other upstream 16841 36235515 ~ 36249775 (-) False G2132966
TU2438943 other upstream 19556 36238230 ~ 36249775 (-) True G2132966
TU2438987 other upstream 44328 36263002 ~ 36263330 (-) True G2133007
TU2439020 other upstream 337826 36556500 ~ 36557453 (-) True LOC110509111

Expression Profile