RNA id: TU2446193


Basic Information

Item Value
RNA id TU2446193
length 533
RNA type TUCP
GC content 0.55
exon number 2
gene id emilin2a
representative True

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 43343531 ~ 43398034 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

AGTTAGAGGCGCGTCTGAATGTGACAGAGCAGAACGCGGAGGTCCACTGTTTCTACGTGGAGGAGAAGCTGACCCGGGCACTAGCCGAGCAAGGGGCGGAGCTACGACAGCTGCTGGAGGAACGAGTAAACGTACTGGAAGACCAGTTTACTACCATGCTGGTCGAGATGAACAACGAGTCATATCctgttggaggaggagggagcGTGGACCTTCAGGCTGAGTTGAACAACAACAAGTTTCTTCTGCAGGGTCTGAATGACAAGGTGACCGCTGTGGCTGAGCTCTGTGCTCCCGGCTGTGGTGGAGGACCTAACACCGGAGGGTTTCCCAACACCAACCCTGGGGCTTCCTCCCACCCTGTAGTTctggacagtgtggtgaaggacCTGAAGCTCTGTTGTAACGACCTGGAAATCCTCCACACGGATGTGACGTCCAACTCTGACAAACTGAGAGAGCTGGAGGAGATTATAGACAGGCAAATGGTGGGGCAGAAGCGGAGTGTTAAGGAGGTGGAGGACCTCCAGAGG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU2446185 lncRNA downstream 42474 43313416 ~ 43332273 (-) False G2138741
TU2446186 lncRNA downstream 42474 43323791 ~ 43332273 (-) True G2138741
TU2446184 lncRNA downstream 59826 43313416 ~ 43314921 (-) False G2138741
TU2446130 lncRNA downstream 69858 43304471 ~ 43304889 (-) True G2138694
TU2446126 lncRNA downstream 90749 43280793 ~ 43283998 (-) True G2138691
TU2446222 lncRNA upstream 23198 43398756 ~ 43398967 (-) True G2138776
TU2446227 lncRNA upstream 31684 43407242 ~ 43407474 (-) True G2138781
TU2446317 lncRNA upstream 68974 43444532 ~ 43448124 (-) False G2138859
TU2446320 lncRNA upstream 68974 43444532 ~ 43445627 (-) False G2138859
TU2446321 lncRNA upstream 68974 43444532 ~ 43446140 (-) False G2138859
XM_036966351.1 mRNA downstream 297287 43041222 ~ 43077460 (-) True LOC118944838
XM_036967031.1 mRNA downstream 387388 42973355 ~ 42987359 (-) True LOC110509179
XM_036967030.1 mRNA downstream 415339 42877496 ~ 42959408 (-) True LOC110508296
XM_036967019.1 mRNA downstream 601910 42733643 ~ 42772837 (-) False LOC110509177
XM_036967020.1 mRNA downstream 601910 42733643 ~ 42772837 (-) False LOC110509177
TU2445575 other downstream 1023295 42349216 ~ 42351452 (-) True G2138294
TU2444991 other downstream 1147782 42220922 ~ 42226965 (-) False G2137814
TU2444984 other downstream 1148383 42220922 ~ 42226364 (-) False G2137814
TU2444782 other downstream 1560546 41810795 ~ 41814201 (-) True G2137648
TU2444670 other downstream 1638358 41731714 ~ 41736389 (-) True G2137555

Expression Profile