Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU2412721 |
| length | 271 |
| lncRNA type | inter_gene |
| GC content | 0.36 |
| exon number | 1 |
| gene id | G2109634 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048592.1 |
| NCBI id | CM023246.2 |
| chromosome length | 43716683 |
| location | 15508840 ~ 15509110 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU2412297 | lncRNA | downstream | 187960 | 15320678 ~ 15320880 (-) | True | G2109228 |
| TU2412277 | lncRNA | downstream | 201360 | 15307257 ~ 15307480 (-) | True | G2109212 |
| TU2412255 | lncRNA | downstream | 211277 | 15297246 ~ 15297563 (-) | True | G2109193 |
| TU2412225 | lncRNA | downstream | 235154 | 15273327 ~ 15273686 (-) | True | G2109163 |
| TU2412218 | lncRNA | downstream | 238651 | 15269987 ~ 15270189 (-) | True | G2109156 |
| TU2412761 | lncRNA | upstream | 52010 | 15561120 ~ 15561394 (-) | True | G2109672 |
| TU2412764 | lncRNA | upstream | 55332 | 15564442 ~ 15564642 (-) | True | G2109675 |
| TU2412773 | lncRNA | upstream | 67515 | 15576625 ~ 15576840 (-) | True | G2109684 |
| TU2412789 | lncRNA | upstream | 87619 | 15596729 ~ 15596940 (-) | True | G2109700 |
| TU2412793 | lncRNA | upstream | 92236 | 15601346 ~ 15601578 (-) | True | G2109704 |
| XM_021588587.2 | mRNA | downstream | 5881 | 15496775 ~ 15502959 (-) | True | irf-10 |
| XM_021588585.2 | mRNA | downstream | 9571 | 15486073 ~ 15499269 (-) | False | irf-10 |
| NM_001310139.1 | mRNA | downstream | 12177 | 15487772 ~ 15496663 (-) | False | irf-10 |
| XM_021589276.2 | mRNA | downstream | 167041 | 15339285 ~ 15341799 (-) | True | LOC110508624 |
| XM_021589275.2 | mRNA | downstream | 173473 | 15332267 ~ 15335367 (-) | True | LOC110508623 |
| XM_021588606.2 | mRNA | upstream | 42578 | 15551688 ~ 15555494 (-) | True | LOC110508170 |
| XM_021589282.2 | mRNA | upstream | 112554 | 15621664 ~ 15700456 (-) | True | LOC110508626 |
| XM_036965990.1 | mRNA | upstream | 194223 | 15703333 ~ 15749647 (-) | False | LOC110508627 |
| XM_021589283.2 | mRNA | upstream | 194223 | 15703333 ~ 15752430 (-) | False | LOC110508627 |
| XM_036965988.1 | mRNA | upstream | 194223 | 15703333 ~ 15752430 (-) | False | LOC110508627 |
| TU2408125 | other | downstream | 4008768 | 11499126 ~ 11500072 (-) | True | G2105419 |
| TU2406504 | other | downstream | 4614760 | 10886198 ~ 10894080 (-) | True | LOC110508522 |
| TU2406439 | other | downstream | 4800341 | 10708012 ~ 10708499 (-) | True | G2103920 |
| TU2405667 | other | downstream | 5302164 | 10206063 ~ 10206676 (-) | True | G2103257 |
| TU2405613 | other | downstream | 5393443 | 10113428 ~ 10115397 (-) | True | G2103203 |
| TU2412752 | other | upstream | 30658 | 15539768 ~ 15554897 (-) | True | G2109663 |
| TU2412794 | other | upstream | 94575 | 15603685 ~ 15604463 (-) | True | G2109705 |
| TU2412853 | other | upstream | 194226 | 15703336 ~ 15710929 (-) | True | LOC110508627 |
| TU2414083 | other | upstream | 1290280 | 16799390 ~ 16799869 (-) | True | G2110939 |
| TU2414937 | other | upstream | 1747098 | 17256208 ~ 17257395 (-) | True | LOC110508646 |
