RNA id: TU2414066



Basic Information


Item Value
RNA id TU2414066
length 309
lncRNA type inter_gene
GC content 0.43
exon number 1
gene id G2110922
representative True

Chromosome Information


Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 16786409 ~ 16786717 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


GTAGTATACTTCATCCAAGGGTCAAGGGTGATATTTGCTGCCCTCTCAGTTCTGAGAAATACCAGTGGCACCCTGTAACGCTTGTCCTTCGGtggaaggaagagtggaccaaagcgcagcgtggaaagtgttcatgatatttatttacaagaaacactcaaacaaaaataacaattcCAAAAACGAACGCGAACAGTTCCCTCAGGCACAGAtcctaaacagaaaataacaccccacaaaacccaaacgggaaatcacaacttatatatgatccccaatcagagacaacgatagacagctgcctctgat

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU2414035 lncRNA downstream 19927 16766229 ~ 16766482 (-) True G2110891
TU2414014 lncRNA downstream 34124 16752078 ~ 16752285 (-) True G2110871
TU2414003 lncRNA downstream 43726 16742457 ~ 16742683 (-) True G2110860
TU2413651 lncRNA downstream 332175 16454018 ~ 16454234 (-) True G2110516
TU2413611 lncRNA downstream 361264 16424925 ~ 16425145 (-) True G2110476
TU2414085 lncRNA upstream 14554 16801271 ~ 16801473 (-) True G2110941
TU2414092 lncRNA upstream 24422 16811139 ~ 16811357 (-) True G2110948
TU2414118 lncRNA upstream 33237 16819954 ~ 16828107 (-) True LOC110508642
TU2414130 lncRNA upstream 49119 16835836 ~ 16836612 (-) False G2110980
TU2414129 lncRNA upstream 49511 16836228 ~ 16836612 (-) False G2110980
XM_021589299.2 mRNA downstream 634652 16143163 ~ 16151757 (-) True LOC110508637
XM_021589291.2 mRNA downstream 732063 16029118 ~ 16054346 (-) True LOC110508634
XM_021589288.2 mRNA downstream 768459 15934185 ~ 16017950 (-) False LOC110508633
XM_021589290.2 mRNA downstream 768459 15934185 ~ 16017950 (-) True LOC110508633
XM_021589287.2 mRNA downstream 865559 15908442 ~ 15920850 (-) False LOC110508632
XR_002471338.2 mRNA upstream 32569 16819286 ~ 16828277 (-) False LOC110508642
XM_021589320.2 mRNA upstream 102815 16889532 ~ 16901564 (-) True LOC110508644
XM_021589323.2 mRNA upstream 467602 17254319 ~ 17260420 (-) False LOC110508646
XM_036966580.1 mRNA upstream 476506 17263223 ~ 17275074 (-) False LOC110508647
XM_036966576.1 mRNA upstream 476506 17263223 ~ 17285016 (-) False LOC110508647
TU2412853 other downstream 1075480 15703336 ~ 15710929 (-) True LOC110508627
TU2412794 other downstream 1181946 15603685 ~ 15604463 (-) True G2109705
TU2412752 other downstream 1231512 15539768 ~ 15554897 (-) True G2109663
TU2408125 other downstream 5286337 11499126 ~ 11500072 (-) True G2105419
TU2406504 other downstream 5892329 10886198 ~ 10894080 (-) True LOC110508522
TU2414083 other upstream 12673 16799390 ~ 16799869 (-) True G2110939
TU2414937 other upstream 469491 17256208 ~ 17257395 (-) True LOC110508646
TU2416252 other upstream 1674457 18461174 ~ 18461538 (-) True G2112905
TU2416270 other upstream 1712824 18499541 ~ 18499966 (-) True G2112922
TU2416574 other upstream 1870836 18657553 ~ 18659728 (-) True G2113211

Expression Profile