RNA id: TU2414084



Basic Information


Item Value
RNA id TU2414084
length 203
lncRNA type inter_gene
GC content 0.44
exon number 1
gene id G2110940
representative True

Chromosome Information


Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 16801279 ~ 16801481 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


gtgttccattatttaaaGTGAAGTGATTctaagtctatgtatatagggcagcagtctcaAATGTGCTAGTGAGGGCTATTTAACAgaatttaacagtctgatggccttgagatagaagctgtttttcagtctctcggtcccagctttgatgcatctgtactgacctcgccttctggatgatagcggggtgaacaggcagtggc

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU2414082 lncRNA upstream 1211 16799420 ~ 16800068 (+) True G2110938
TU2414071 lncRNA upstream 8670 16792388 ~ 16792609 (+) True G2110927
TU2414036 lncRNA upstream 33996 16766994 ~ 16767283 (+) True G2110892
TU2414034 lncRNA upstream 34884 16766195 ~ 16766395 (+) True G2110890
TU2414024 lncRNA upstream 43350 16757692 ~ 16757929 (+) True G2110881
TU2414115 lncRNA downstream 34354 16835835 ~ 16836586 (+) True G2110968
TU2414155 lncRNA downstream 86059 16887540 ~ 16889267 (+) True G2111002
TU2414151 lncRNA downstream 121807 16923288 ~ 16925687 (+) True G2110998
TU2414315 lncRNA downstream 375937 17177418 ~ 17177657 (+) True G2111155
TU2414368 lncRNA downstream 460318 17261799 ~ 17265127 (+) True G2111203
XM_036965888.1 mRNA upstream 259700 16458212 ~ 16541579 (+) True LOC110508639
LOC110508172 mRNA upstream 505000 16295344 ~ 16296279 (+) True LOC110508172
XM_021589302.2 mRNA upstream 608152 16170026 ~ 16193127 (+) False LOC110508638
XM_036966542.1 mRNA downstream 7990 16809471 ~ 16813125 (+) False LOC110508278
XM_021589308.2 mRNA downstream 22778 16824259 ~ 16839283 (+) False LOC110508640
XM_021589305.2 mRNA downstream 23531 16825012 ~ 16839283 (+) False LOC110508640
XM_021589307.2 mRNA downstream 23534 16825015 ~ 16839283 (+) False LOC110508640
XM_021589306.2 mRNA downstream 24011 16825492 ~ 16839283 (+) False LOC110508640
TU2413642 other upstream 352777 16448112 ~ 16448502 (+) True G2110507
TU2413068 other upstream 852418 15948308 ~ 15948861 (+) True G2109955
TU2413061 other upstream 862422 15938511 ~ 15938857 (+) True G2109948
TU2409894 other upstream 2888052 13911427 ~ 13913227 (+) True G2107033
TU2409352 other upstream 3657684 13143313 ~ 13143595 (+) True G2106557
TU2414093 other downstream 11113 16812594 ~ 16812796 (+) True LOC110508278
TU2414198 other downstream 152303 16953784 ~ 16958852 (+) True G2111044
TU2414472 other downstream 609663 17411144 ~ 17416232 (+) True G2111300
TU2414638 other downstream 906775 17708256 ~ 17708629 (+) True G2111457
TU2414674 other downstream 953456 17754937 ~ 17755581 (+) True G2111491

Expression Profile