RNA id: TU2414131



Basic Information


Item Value
RNA id TU2414131
length 275
lncRNA type intronic
GC content 0.50
exon number 2
gene id G2110980
representative False

Chromosome Information


Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 16835836 ~ 16836853 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


tgtgtctctctctgtgtgtgtgtgtgtctctctctgtgtgtgtgtgtgtctctctctctctgtgtgtgtgtgtgtctctctctctctgtgtgtgtgtgtctctctctctctgtgtgtgtgtgtctctctctctctctctgtgtgtgtgtgtgtctctctctctctctctgtgtgtgtgtgtgtctctctctctctctctgtgtgtgtgtgtgtctctctctctctctgtgtgtgtgtgtctctctctctctgtgtgtgtgtgtctctctctctct

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU2414118 lncRNA downstream 8121 16819954 ~ 16828107 (-) True LOC110508642
TU2414092 lncRNA downstream 24871 16811139 ~ 16811357 (-) True G2110948
TU2414085 lncRNA downstream 34755 16801271 ~ 16801473 (-) True G2110941
TU2414066 lncRNA downstream 49511 16786409 ~ 16786717 (-) True G2110922
TU2414035 lncRNA downstream 69746 16766229 ~ 16766482 (-) True G2110891
TU2414698 lncRNA upstream 3401 16840013 ~ 16840223 (-) True G2111501
TU2414694 lncRNA upstream 58327 16894939 ~ 16925687 (-) True G2111499
TU2414765 lncRNA upstream 102417 16939029 ~ 16939257 (-) True G2111565
TU2414773 lncRNA upstream 121735 16958347 ~ 16963196 (-) True G2111573
TU2414858 lncRNA upstream 316533 17153145 ~ 17154914 (-) True G2111655
XR_002471338.2 mRNA downstream 7951 16819286 ~ 16828277 (-) False LOC110508642
XM_021589299.2 mRNA downstream 684471 16143163 ~ 16151757 (-) True LOC110508637
XM_021589291.2 mRNA downstream 781882 16029118 ~ 16054346 (-) True LOC110508634
XM_021589288.2 mRNA downstream 818278 15934185 ~ 16017950 (-) False LOC110508633
XM_021589320.2 mRNA upstream 52920 16889532 ~ 16901564 (-) True LOC110508644
XM_021589323.2 mRNA upstream 417707 17254319 ~ 17260420 (-) False LOC110508646
XM_036966580.1 mRNA upstream 426611 17263223 ~ 17275074 (-) False LOC110508647
XM_036966576.1 mRNA upstream 426611 17263223 ~ 17285016 (-) False LOC110508647
XM_036966577.1 mRNA upstream 426611 17263223 ~ 17285049 (-) False LOC110508647
TU2414083 other downstream 36359 16799390 ~ 16799869 (-) True G2110939
TU2412853 other downstream 1125299 15703336 ~ 15710929 (-) True LOC110508627
TU2412794 other downstream 1231765 15603685 ~ 15604463 (-) True G2109705
TU2412752 other downstream 1281331 15539768 ~ 15554897 (-) True G2109663
TU2408125 other downstream 5336156 11499126 ~ 11500072 (-) True G2105419
TU2414937 other upstream 419596 17256208 ~ 17257395 (-) True LOC110508646
TU2416252 other upstream 1624562 18461174 ~ 18461538 (-) True G2112905
TU2416270 other upstream 1662929 18499541 ~ 18499966 (-) True G2112922
TU2416574 other upstream 1820941 18657553 ~ 18659728 (-) True G2113211
TU2416653 other upstream 1905306 18741918 ~ 18742284 (-) True G2113287

Expression Profile