RNA id: TU2416649



Basic Information


Item Value
RNA id TU2416649
length 206
lncRNA type intronic
GC content 0.36
exon number 1
gene id G2113283
representative True

Chromosome Information


Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 18736049 ~ 18736254 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


cagtgaagacatcaaaactaggaaataacccatatggaatcatgtagtaacccaaaaaagtgttaaacatttcaattaacaggtgtgccttgagaAAAGTAACATTTCTGGAACTTCTTTCTGaacgcatttgagccaatcagttgtattgtgacaaggtaggggcggtagctctatttggtaaaagaccaagtccatattattat

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU2416648 lncRNA downstream 713 18735104 ~ 18735336 (-) True G2113282
TU2416645 lncRNA downstream 3293 18732503 ~ 18732756 (-) True G2113279
TU2416629 lncRNA downstream 15639 18717106 ~ 18720410 (-) True G2113263
TU2416345 lncRNA downstream 164662 18571103 ~ 18571387 (-) True G2112997
TU2416343 lncRNA downstream 165369 18570027 ~ 18570680 (-) True G2112995
TU2416650 lncRNA upstream 113 18736367 ~ 18736662 (-) True G2113284
TU2416652 lncRNA upstream 3483 18739737 ~ 18740147 (-) True G2113286
TU2416654 lncRNA upstream 7534 18743788 ~ 18744033 (-) True G2113288
TU2416658 lncRNA upstream 11993 18748247 ~ 18748529 (-) True G2113292
TU2416670 lncRNA upstream 31997 18768251 ~ 18768719 (-) True G2113303
XM_021589368.2 mRNA downstream 218852 18484345 ~ 18517197 (-) True LOC110508666
XM_036967039.1 mRNA downstream 254716 18428824 ~ 18481333 (-) False LOC110508665
XM_021589379.2 mRNA upstream 102059 18838313 ~ 18849108 (-) False LOC110508670
XM_021589378.2 mRNA upstream 102059 18838313 ~ 18849139 (-) True LOC110508670
XM_021589380.2 mRNA upstream 128585 18864839 ~ 18879323 (-) True LOC110508671
XM_036966604.1 mRNA upstream 144436 18880690 ~ 18927009 (-) False LOC110508176
XM_036966605.1 mRNA upstream 164018 18900272 ~ 18927013 (-) True LOC110508176
TU2416574 other downstream 76321 18657553 ~ 18659728 (-) True G2113211
TU2416270 other downstream 236083 18499541 ~ 18499966 (-) True G2112922
TU2416252 other downstream 274511 18461174 ~ 18461538 (-) True G2112905
TU2414937 other downstream 1478654 17256208 ~ 17257395 (-) True LOC110508646
TU2414083 other downstream 1936180 16799390 ~ 16799869 (-) True G2110939
TU2416653 other upstream 5664 18741918 ~ 18742284 (-) True G2113287
TU2416687 other upstream 48643 18784897 ~ 18785322 (-) True G2113320
TU2416848 other upstream 221790 18958044 ~ 18966479 (-) False LOC118944847
TU2416847 other upstream 221856 18958110 ~ 18966479 (-) False LOC118944847
TU2416849 other upstream 221856 18958110 ~ 18959832 (-) True LOC118944847

Expression Profile