RNA id: TU2416653



Basic Information


Item Value
RNA id TU2416653
length 367
RNA type TUCP
GC content 0.47
exon number 1
gene id G2113287
representative True

Chromosome Information


Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 18741918 ~ 18742284 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


aagcagacacatcgatggctctgaacaaactttatttaactctctgcaaactggaaacaatttatccggaggctgctttcattgtagctggggattttaacaaggctaatctgaaaacaagactccccaaattttatcagcatatcgattgcgcaaccaggggtggaaaaaccttggatcattgttactctaacttccgcgacgcatataaggccctgccccgcccccctttcggaaaagctgaccacgactccattttgttgatccctgcctacagacagaaactaaaacaagaggctcccacgctaaggtctgtccaacgctggtccgaccaagctgactccacactccaagactgcttccatca

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU2416652 lncRNA downstream 1771 18739737 ~ 18740147 (-) True G2113286
TU2416650 lncRNA downstream 5256 18736367 ~ 18736662 (-) True G2113284
TU2416649 lncRNA downstream 5664 18736049 ~ 18736254 (-) True G2113283
TU2416648 lncRNA downstream 6582 18735104 ~ 18735336 (-) True G2113282
TU2416645 lncRNA downstream 9162 18732503 ~ 18732756 (-) True G2113279
TU2416654 lncRNA upstream 1504 18743788 ~ 18744033 (-) True G2113288
TU2416658 lncRNA upstream 5963 18748247 ~ 18748529 (-) True G2113292
TU2416670 lncRNA upstream 25967 18768251 ~ 18768719 (-) True G2113303
TU2416674 lncRNA upstream 31431 18773715 ~ 18774164 (-) True G2113307
TU2416675 lncRNA upstream 31899 18774183 ~ 18774400 (-) True G2113308
XM_021589368.2 mRNA downstream 224721 18484345 ~ 18517197 (-) True LOC110508666
XM_036967039.1 mRNA downstream 260585 18428824 ~ 18481333 (-) False LOC110508665
XM_021589379.2 mRNA upstream 96029 18838313 ~ 18849108 (-) False LOC110508670
XM_021589378.2 mRNA upstream 96029 18838313 ~ 18849139 (-) True LOC110508670
XM_021589380.2 mRNA upstream 122555 18864839 ~ 18879323 (-) True LOC110508671
XM_036966604.1 mRNA upstream 138406 18880690 ~ 18927009 (-) False LOC110508176
XM_036966605.1 mRNA upstream 157988 18900272 ~ 18927013 (-) True LOC110508176
TU2416574 other downstream 82190 18657553 ~ 18659728 (-) True G2113211
TU2416270 other downstream 241952 18499541 ~ 18499966 (-) True G2112922
TU2416252 other downstream 280380 18461174 ~ 18461538 (-) True G2112905
TU2414937 other downstream 1484523 17256208 ~ 17257395 (-) True LOC110508646
TU2414083 other downstream 1942049 16799390 ~ 16799869 (-) True G2110939
TU2416687 other upstream 42613 18784897 ~ 18785322 (-) True G2113320
TU2416848 other upstream 215760 18958044 ~ 18966479 (-) False LOC118944847
TU2416847 other upstream 215826 18958110 ~ 18966479 (-) False LOC118944847
TU2416849 other upstream 215826 18958110 ~ 18959832 (-) True LOC118944847
TU2416904 other upstream 264948 19007232 ~ 19009665 (-) False G2113520

Expression Profile