Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU2417390 |
| length | 649 |
| lncRNA type | inter_gene |
| GC content | 0.39 |
| exon number | 1 |
| gene id | G2113954 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048592.1 |
| NCBI id | CM023246.2 |
| chromosome length | 43716683 |
| location | 19326072 ~ 19326720 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | description |
|---|
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU2417388 | lncRNA | downstream | 1337 | 19321641 ~ 19324735 (-) | True | G2113953 |
| TU2417306 | lncRNA | downstream | 120672 | 19205189 ~ 19205400 (-) | True | G2113873 |
| TU2417305 | lncRNA | downstream | 120964 | 19204844 ~ 19205108 (-) | True | G2113872 |
| TU2417304 | lncRNA | downstream | 121816 | 19204057 ~ 19204256 (-) | True | G2113871 |
| TU2417266 | lncRNA | downstream | 129014 | 19193808 ~ 19197058 (-) | True | sc61g |
| TU2417422 | lncRNA | upstream | 69993 | 19396713 ~ 19397180 (-) | True | G2113978 |
| TU2417426 | lncRNA | upstream | 76728 | 19403448 ~ 19403721 (-) | True | G2113982 |
| TU2417432 | lncRNA | upstream | 80401 | 19407121 ~ 19407379 (-) | True | G2113988 |
| TU2418253 | lncRNA | upstream | 147147 | 19473867 ~ 19474185 (-) | True | G2114754 |
| TU2418256 | lncRNA | upstream | 149111 | 19475831 ~ 19476031 (-) | True | G2114757 |
| XM_036965998.1 | mRNA | downstream | 70139 | 19209199 ~ 19255933 (-) | True | pkia |
| XR_002471343.1 | mRNA | downstream | 114415 | 19209199 ~ 19211657 (-) | False | pkia |
| XR_002471344.1 | mRNA | downstream | 114431 | 19209199 ~ 19211641 (-) | False | pkia |
| NM_001160688.2 | mRNA | downstream | 129028 | 19193811 ~ 19197044 (-) | False | sc61g |
| XM_021588582.2 | mRNA | downstream | 129099 | 19193808 ~ 19196973 (-) | False | sc61g |
| XM_021589398.2 | mRNA | upstream | 6347 | 19333067 ~ 19341851 (-) | True | LOC110508682 |
| XM_021589399.2 | mRNA | upstream | 20586 | 19347306 ~ 19359361 (-) | False | LOC110508683 |
| XM_021589400.2 | mRNA | upstream | 20586 | 19347306 ~ 19359854 (-) | True | LOC110508683 |
| XM_021589402.2 | mRNA | upstream | 32797 | 19359517 ~ 19361133 (-) | True | atpsckmt |
| XM_021589401.2 | mRNA | upstream | 34340 | 19361060 ~ 19367850 (-) | True | LOC110508684 |
| TU2417253 | other | downstream | 204016 | 19116090 ~ 19122056 (-) | True | LOC110508678 |
| TU2416904 | other | downstream | 316407 | 19007232 ~ 19009665 (-) | False | G2113520 |
| TU2416913 | other | downstream | 317575 | 19007232 ~ 19008497 (-) | False | G2113520 |
| TU2416847 | other | downstream | 359593 | 18958110 ~ 18966479 (-) | False | LOC118944847 |
| TU2419508 | other | upstream | 1532420 | 20859140 ~ 20859530 (-) | True | G2115838 |
| TU2421079 | other | upstream | 2543965 | 21870685 ~ 21871053 (-) | True | G2117313 |
| TU2421081 | other | upstream | 2546496 | 21873216 ~ 21876650 (-) | True | mrps14 |
| TU2421094 | other | upstream | 2616261 | 21942981 ~ 21948258 (-) | False | LOC110508740 |
| TU2421095 | other | upstream | 2616261 | 21942981 ~ 21948258 (-) | False | LOC110508740 |
