RNA id: TU2425810



Basic Information


Item Value
RNA id TU2425810
length 214
lncRNA type inter_gene
GC content 0.46
exon number 1
gene id G2121610
representative True

Chromosome Information


Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 25442093 ~ 25442306 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


ctccctcttggtcaaatagaccttacagagcctggaggtgtgttgcttcattgtcctgttgaaaagtaaatgatagtcccacttagcccaaaccagatgggatggcgtatcgctgttgtagccatgctggttatatgtgccttggattctaaataaatcaccaacagtgtcacaagaaaagcacccccacacaatcaaACCTCCTCGTtgatgc

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU2425799 lncRNA downstream 19733 25422128 ~ 25422360 (-) True G2121599
TU2425780 lncRNA downstream 44245 25397612 ~ 25397848 (-) True G2121580
TU2425748 lncRNA downstream 111234 25329442 ~ 25330859 (-) True G2121549
TU2425625 lncRNA downstream 229606 25209088 ~ 25212487 (-) False G2121436
TU2425626 lncRNA downstream 229606 25209088 ~ 25212487 (-) True G2121436
TU2425841 lncRNA upstream 37245 25479551 ~ 25479841 (-) True G2121641
TU2425855 lncRNA upstream 54803 25497109 ~ 25497341 (-) True G2121655
TU2425930 lncRNA upstream 128044 25570350 ~ 25570554 (-) True G2121726
TU2425934 lncRNA upstream 130078 25572384 ~ 25572717 (-) True G2121730
TU2425954 lncRNA upstream 141354 25583660 ~ 25583904 (-) True G2121750
XM_036966784.1 mRNA downstream 29761 25344450 ~ 25412332 (-) True LOC110508789
XM_036966783.1 mRNA downstream 77022 25344450 ~ 25365071 (-) False LOC110508789
XM_021589613.2 mRNA downstream 209563 25215342 ~ 25232530 (-) False LOC110508788
XM_036966572.1 mRNA downstream 209563 25215342 ~ 25232530 (-) True LOC110508788
XM_036966397.1 mRNA downstream 764941 24664869 ~ 24677152 (-) False LOC110508783
XM_036966015.1 mRNA upstream 240012 25682318 ~ 26069267 (-) False LOC110508791
XM_036966012.1 mRNA upstream 240012 25682318 ~ 26069268 (-) False LOC110508791
XM_036966014.1 mRNA upstream 240012 25682318 ~ 26069268 (-) False LOC110508791
XM_036965987.1 mRNA upstream 688121 26130427 ~ 26266904 (-) True LOC110508193
XM_036966674.1 mRNA upstream 853468 26295774 ~ 26558418 (-) False LOC110508194
TU2425648 other downstream 167467 25198248 ~ 25274626 (-) True G2121457
TU2425635 other downstream 293573 25144062 ~ 25148520 (-) True G2121444
TU2424996 other downstream 707106 24730674 ~ 24734987 (-) True G2120836
TU2424934 other downstream 772527 24664874 ~ 24669566 (-) False LOC110508783
TU2423555 other downstream 2112478 23325001 ~ 23329615 (-) True LOC110508185
TU2426633 other upstream 424995 25867301 ~ 26069209 (-) True LOC110508791
TU2426815 other upstream 504427 25946733 ~ 25950453 (-) True G2122515
TU2429842 other upstream 3102635 28544941 ~ 28551514 (-) False G2125203
TU2429843 other upstream 3102635 28544941 ~ 28551514 (-) True G2125203
TU2429906 other upstream 3184749 28627055 ~ 28685735 (-) True G2125253

Expression Profile