RNA id: TU2432047



Basic Information


Item Value
RNA id TU2432047
length 338
lncRNA type antisense_over
GC content 0.36
exon number 1
gene id G2127106
representative True

Chromosome Information


Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 30311204 ~ 30311541 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


ctctactattattctgacatttcacattcttaaaataaagtggtgatcctaactgacctaagacaggggatttttactaggaataaatgtcaggaattgtgaaaaactgagtttaaatgtatttggctaaggtgtatgtaaacttcaactgtaaatgataGCCAATATATATGTCAACAAAAGAGTAAACGTGTTCAATTTAGGGTAAGACCACAAATATTTCAAATCAGAGTCCTACAAACACACTTACCTGAAAAGGCATGTCAATGGTGCCATTTCCAATCTGATTGACATTTGGCAATGATCCGCCATAATACTGCCCACGGTTTTGTCCCAAC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU2432043 lncRNA downstream 6549 30304423 ~ 30304655 (-) True G2127102
TU2431993 lncRNA downstream 87614 30195130 ~ 30223590 (-) True G2127056
TU2431967 lncRNA downstream 167995 30137109 ~ 30143209 (-) True G2127031
TU2431956 lncRNA downstream 184344 30126616 ~ 30126860 (-) True G2127025
TU2431919 lncRNA downstream 261511 30047809 ~ 30049693 (-) True G2126989
TU2432049 lncRNA upstream 599 30312140 ~ 30312388 (-) True G2127108
TU2432050 lncRNA upstream 1936 30313477 ~ 30313708 (-) True G2127109
TU2432058 lncRNA upstream 11857 30323398 ~ 30325462 (-) True G2127116
TU2432066 lncRNA upstream 19845 30331386 ~ 30331689 (-) True G2127124
TU2432112 lncRNA upstream 111328 30422869 ~ 30423078 (-) True G2127168
XR_002471374.2 mRNA downstream 6792 30301087 ~ 30304412 (-) True LOC110508912
XR_002471372.2 mRNA downstream 31964 30273893 ~ 30279240 (-) True LOC110508910
XM_021589814.2 mRNA downstream 57834 30188885 ~ 30253370 (-) True mast3a
XM_021589813.2 mRNA downstream 68186 30188885 ~ 30243018 (-) False mast3a
XM_021589812.2 mRNA downstream 123944 30144035 ~ 30187260 (-) True LOC110508907
XM_021589828.2 mRNA upstream 88170 30399711 ~ 30401538 (-) False LOC110508917
XM_021589830.2 mRNA upstream 97730 30409271 ~ 30416644 (-) True angptl4
XM_021589831.2 mRNA upstream 130472 30442013 ~ 30447448 (-) False LOC110508919
XM_036967076.1 mRNA upstream 318401 30629942 ~ 30649835 (-) False LOC110508217
XM_036967077.1 mRNA upstream 318401 30629942 ~ 30649835 (-) False LOC110508217
TU2430565 other downstream 1187462 29118684 ~ 29123742 (-) True LOC118944842
TU2430562 other downstream 1232460 29078039 ~ 29078744 (-) True G2125813
TU2430463 other downstream 1425350 28885468 ~ 28885854 (-) True G2125723
TU2429949 other downstream 1618734 28692139 ~ 28692470 (-) True G2125290
TU2429926 other downstream 1647778 28662708 ~ 28663426 (-) True G2125270
TU2432085 other upstream 89672 30401213 ~ 30401807 (-) True LOC110508917
TU2432121 other upstream 122894 30434435 ~ 30434854 (-) True G2127177
TU2432439 other upstream 242048 30553589 ~ 30555187 (-) True G2127455
TU2432521 other upstream 393544 30705085 ~ 30706545 (-) True LOC110508928
TU2433286 other upstream 932550 31244091 ~ 31244692 (-) True G2128216

Expression Profile