RNA id: TU2432486



Basic Information


Item Value
RNA id TU2432486
length 206
lncRNA type intronic
GC content 0.33
exon number 2
gene id G2127498
representative True

Chromosome Information


Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 30642064 ~ 30642325 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


ggaaaaattacttatcatgcacaaagtagatgtcctaaccgacttgccaaatctatagttgtttaacaagaaatttgtggagtggttgaaaaacaagttttaatgactccaacctaagtgtatgtaaacttctgacttcaactgtatagttgGACATATTAAATACCTTAACTATGGCTAGAACTATTTAATACCTTAACTATGGC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU2432485 lncRNA downstream 49 30641631 ~ 30642015 (-) True G2127497
TU2432482 lncRNA downstream 9134 30632714 ~ 30632930 (-) True G2127494
TU2432480 lncRNA downstream 10579 30629942 ~ 30631485 (-) False LOC110508217
TU2432479 lncRNA downstream 13361 30627648 ~ 30628703 (-) True G2127491
TU2432473 lncRNA downstream 26541 30615210 ~ 30615523 (-) True G2127485
TU2432488 lncRNA upstream 2009 30644334 ~ 30644614 (-) True G2127500
TU2432481 lncRNA upstream 5956 30648281 ~ 30649764 (-) True LOC110508217
TU2432491 lncRNA upstream 16182 30658507 ~ 30661740 (-) False G2127503
TU2432492 lncRNA upstream 17482 30659807 ~ 30661740 (-) True G2127503
TU2432499 lncRNA upstream 25398 30667723 ~ 30667989 (-) True G2127507
XM_021589831.2 mRNA downstream 194616 30442013 ~ 30447448 (-) False LOC110508919
XM_021589830.2 mRNA downstream 225420 30409271 ~ 30416644 (-) True angptl4
XM_021589828.2 mRNA downstream 240526 30399711 ~ 30401538 (-) False LOC110508917
XR_002471374.2 mRNA downstream 337652 30301087 ~ 30304412 (-) True LOC110508912
XR_002471372.2 mRNA downstream 362824 30273893 ~ 30279240 (-) True LOC110508910
XM_021589842.2 mRNA upstream 58217 30700542 ~ 30704777 (-) False LOC110508927
XM_021589843.2 mRNA upstream 62760 30705085 ~ 30706591 (-) False LOC110508928
XM_021589856.2 mRNA upstream 263554 30905879 ~ 30907975 (-) True ptger4c
XM_021589860.2 mRNA upstream 336394 30978719 ~ 30980452 (-) False LOC110508937
XM_036966461.1 mRNA upstream 336658 30978983 ~ 30980313 (-) True LOC110508937
TU2432439 other downstream 86877 30553589 ~ 30555187 (-) True G2127455
TU2432121 other downstream 207210 30434435 ~ 30434854 (-) True G2127177
TU2432085 other downstream 240257 30401213 ~ 30401807 (-) True LOC110508917
TU2430565 other downstream 1518322 29118684 ~ 29123742 (-) True LOC118944842
TU2430562 other downstream 1563320 29078039 ~ 29078744 (-) True G2125813
TU2432521 other upstream 62760 30705085 ~ 30706545 (-) True LOC110508928
TU2433286 other upstream 601766 31244091 ~ 31244692 (-) True G2128216
TU2433314 other upstream 676958 31319283 ~ 31320623 (-) False G2128242
TU2433312 other upstream 677016 31319341 ~ 31323364 (-) False G2128242
TU2433313 other upstream 677016 31319341 ~ 31323364 (-) True G2128242

Expression Profile