RNA id: TU2433262


Basic Information

Item Value
RNA id TU2433262
length 231
lncRNA type read_through
GC content 0.31
exon number 2
gene id G2128200
representative False

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 31245122 ~ 31283855 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

ggagaacttgcacaattggtggctgactaaatacttttttgccccactctatgTTCTGAAGATATACATTTTtgctgcatttttttttaaatatgcaaTCATTGTACTTTTAGATATCTACATTACATTTATGAACCTCTTAAAAATGACTTTGTTCCTTAATTTTCTTCCCTCTGTGCGGTTATATTTTATGACTTTAATCAGTGCGAACATTGAATGCAAAAATCTCAT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU2433285 lncRNA downstream 2681 31242167 ~ 31242441 (-) True G2128215
TU2433259 lncRNA downstream 25213 31219062 ~ 31219909 (-) True G2128197
TU2432830 lncRNA downstream 109031 30995158 ~ 31136091 (-) False G2127817
TU2432829 lncRNA downstream 109031 31084190 ~ 31136091 (-) True G2127817
TU2432678 lncRNA downstream 259008 30985073 ~ 30986114 (-) True G2127673
TU2433297 lncRNA upstream 60306 31341989 ~ 31342117 (-) False LOC118944817
TU2433296 lncRNA upstream 60550 31342233 ~ 31342593 (-) True LOC118944817
TU2433338 lncRNA upstream 89906 31371589 ~ 31371788 (-) True G2128266
TU2433342 lncRNA upstream 100074 31381757 ~ 31381985 (-) False LOC110508218
TU2433364 lncRNA upstream 103522 31385205 ~ 31385435 (-) True G2128288
XM_036966574.1 mRNA downstream 31043 31173927 ~ 31214079 (-) True LOC110508942
XM_036966586.1 mRNA downstream 75828 31138086 ~ 31169294 (-) True LOC110508941
XM_021589863.2 mRNA downstream 108955 31084315 ~ 31136167 (-) True LOC110508940
XM_021589861.2 mRNA downstream 240833 30995095 ~ 31004289 (-) True LOC110508938
XM_036966461.1 mRNA downstream 264809 30978983 ~ 30980313 (-) True LOC110508937
XM_021589871.2 mRNA upstream 3463 31285146 ~ 31304046 (-) False LOC110508945
XM_021589867.2 mRNA upstream 3463 31285146 ~ 31305210 (-) False LOC110508945
XM_021589869.2 mRNA upstream 3463 31285146 ~ 31305211 (-) False LOC110508945
XM_036966529.1 mRNA upstream 3463 31285146 ~ 31305211 (-) False LOC110508945
XM_021589868.2 mRNA upstream 3464 31285147 ~ 31305210 (-) False LOC110508945
TU2433286 other downstream 430 31244091 ~ 31244692 (-) True G2128216
TU2432521 other downstream 538577 30705085 ~ 30706545 (-) True LOC110508928
TU2432439 other downstream 689935 30553589 ~ 30555187 (-) True G2127455
TU2432121 other downstream 810268 30434435 ~ 30434854 (-) True G2127177
TU2432085 other downstream 843315 30401213 ~ 30401807 (-) True LOC110508917
TU2433314 other upstream 37600 31319283 ~ 31320623 (-) False G2128242
TU2433312 other upstream 37658 31319341 ~ 31323364 (-) False G2128242
TU2433313 other upstream 37658 31319341 ~ 31323364 (-) True G2128242
TU2433533 other upstream 429925 31711608 ~ 31737492 (-) True LOC110508968
TU2433711 other upstream 601032 31882715 ~ 31883140 (-) True G2128568

Expression Profile