Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00055695 |
| length | 1293 |
| RNA type | mRNA |
| GC content | 0.33 |
| exon number | 2 |
| gene id | XLOC_028727 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007115.7 |
| NCBI id | CM002888.2 |
| chromosome length | 78093715 |
| location | 18952482 ~ 18965164 (-) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0016020 | membrane | cellular_component |
| GO:0016021 | integral component of membrane | cellular_component |
| id | description |
|---|---|
| ZDB-GENE-041210-182 | Predicted to be located in membrane. Predicted to be integral component of membrane. |
| ensembl_id | ENSDART00000144814 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00058188 | lncRNA | downstream | 237556 | 18712763 ~ 18714926 (-) | True | XLOC_028722 |
| TCONS_00057349 | lncRNA | downstream | 272790 | 18654682 ~ 18679692 (-) | True | XLOC_028721 |
| TCONS_00055681 | lncRNA | downstream | 345915 | 18605935 ~ 18606567 (-) | True | XLOC_028717 |
| TCONS_00058187 | lncRNA | downstream | 1069552 | 17875071 ~ 17882930 (-) | True | XLOC_028707 |
| TCONS_00058186 | lncRNA | downstream | 1069605 | 17875071 ~ 17882877 (-) | False | XLOC_028707 |
| TCONS_00057350 | lncRNA | upstream | 314384 | 19268385 ~ 19285442 (-) | False | XLOC_028731 |
| TCONS_00057351 | lncRNA | upstream | 330657 | 19284658 ~ 19369740 (-) | False | XLOC_028731 |
| TCONS_00058193 | lncRNA | upstream | 412362 | 19366363 ~ 19369740 (-) | False | XLOC_028731 |
| TCONS_00058194 | lncRNA | upstream | 412362 | 19366363 ~ 19369785 (-) | True | XLOC_028731 |
| TCONS_00058195 | lncRNA | upstream | 580460 | 19534461 ~ 19539090 (-) | True | XLOC_028733 |
| TCONS_00055693 | mRNA | downstream | 13144 | 18852821 ~ 18939338 (-) | False | XLOC_028726 |
| TCONS_00055694 | mRNA | downstream | 13144 | 18853475 ~ 18939338 (-) | True | XLOC_028726 |
| TCONS_00055692 | mRNA | downstream | 101117 | 18846624 ~ 18851365 (-) | True | XLOC_028725 |
| TCONS_00055691 | mRNA | downstream | 101683 | 18839856 ~ 18850799 (-) | False | XLOC_028725 |
| TCONS_00055690 | mRNA | downstream | 111411 | 18837799 ~ 18841071 (-) | False | XLOC_028725 |
| TCONS_00055696 | mRNA | upstream | 31528 | 18985529 ~ 19028861 (-) | False | XLOC_028728 |
| TCONS_00055697 | mRNA | upstream | 33372 | 18987373 ~ 19016396 (-) | True | XLOC_028728 |
| TCONS_00055698 | mRNA | upstream | 77767 | 19031768 ~ 19033805 (-) | True | XLOC_028729 |
| TCONS_00055700 | mRNA | upstream | 442944 | 19396945 ~ 19694108 (-) | False | XLOC_028732 |
| TCONS_00055701 | mRNA | upstream | 648965 | 19602966 ~ 19693978 (-) | True | XLOC_028732 |
| TCONS_00055684 | other | downstream | 298221 | 18654155 ~ 18654261 (-) | True | XLOC_028720 |
| TCONS_00055683 | other | downstream | 299241 | 18653148 ~ 18653241 (-) | True | XLOC_028719 |
| TCONS_00055676 | other | downstream | 345944 | 18597660 ~ 18606538 (-) | False | XLOC_028717 |
| TCONS_00055674 | other | downstream | 357342 | 18593830 ~ 18595140 (-) | True | XLOC_028716 |
| TCONS_00055660 | other | downstream | 762962 | 18189406 ~ 18189520 (-) | True | XLOC_028709 |
| TCONS_00055699 | other | upstream | 93465 | 19047466 ~ 19047555 (-) | True | XLOC_028730 |
| TCONS_00055714 | other | upstream | 1095323 | 20049324 ~ 20063234 (-) | True | XLOC_028742 |
| TCONS_00055724 | other | upstream | 1222142 | 20176143 ~ 20177868 (-) | False | XLOC_028749 |
| TCONS_00055737 | other | upstream | 1442048 | 20396049 ~ 20396170 (-) | True | XLOC_028756 |
| TCONS_00055751 | other | upstream | 2697670 | 21651671 ~ 21652632 (-) | True | XLOC_028763 |
