RNA id: TU2433711


Basic Information

Item Value
RNA id TU2433711
length 426
RNA type TUCP
GC content 0.41
exon number 1
gene id G2128568
representative True

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 31882715 ~ 31883140 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

ggaccattctggaagaaaacctgatggagtctgcaaaagacctgagactgggacggagatttgtcttccaacaagacaatgatccaaaacataacgcaaaatctacaatggaatggttcaaaaataaacatatccaggtgttagaatggccaagtcaaagtccagacctgaatccaatcgagaatctgtggaaagaactgaaaactgctgttcacaaatgctctccatccaacctcactgagctcgagctgttttgcaaggaggaatgggaaaaaatttcagtctctcgatgtgcaaaactgataagagacataccccaagcgacttacagctgtaatcgcagcaaaaggtggcgctacaaagtattaacttaagggggctgaataattttgcacggccaatttttcagtttttgatttgttaaaa

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU2433699 lncRNA downstream 3206 31877392 ~ 31879509 (-) True G2128556
TU2433673 lncRNA downstream 81400 31795433 ~ 31801315 (-) True G2128536
TU2433658 lncRNA downstream 109056 31773421 ~ 31773659 (-) True G2128524
TU2433656 lncRNA downstream 109922 31771823 ~ 31772793 (-) True G2128522
TU2433552 lncRNA downstream 121050 31710290 ~ 31761665 (-) False LOC110508968
TU2433712 lncRNA upstream 439 31883579 ~ 31884197 (-) True G2128569
TU2433717 lncRNA upstream 5909 31889049 ~ 31889264 (-) True G2128574
TU2433720 lncRNA upstream 10403 31893543 ~ 31894583 (-) True G2128577
TU2433725 lncRNA upstream 12556 31895696 ~ 31898461 (-) True G2128582
TU2433726 lncRNA upstream 15593 31898733 ~ 31898993 (-) True G2128583
XM_036966643.1 mRNA downstream 23615 31822142 ~ 31859100 (-) False LOC110508970
XM_036966644.1 mRNA downstream 23615 31822142 ~ 31859100 (-) False LOC110508970
XM_036966646.1 mRNA downstream 23615 31822142 ~ 31859100 (-) False LOC110508970
XM_036966647.1 mRNA downstream 23615 31822142 ~ 31859100 (-) True LOC110508970
XM_021588580.2 mRNA downstream 119627 31751423 ~ 31763088 (-) True nilt3
XM_021589911.2 mRNA upstream 69059 31952199 ~ 31954935 (-) True LOC110508975
XR_002471379.2 mRNA upstream 77361 31960501 ~ 31967067 (-) False LOC110508977
XR_002471380.2 mRNA upstream 118115 32001255 ~ 32006090 (-) False LOC110508978
LOC110508982 mRNA upstream 139917 32023057 ~ 32028435 (-) False LOC110508982
XM_036966563.1 mRNA upstream 151683 32034823 ~ 32051914 (-) False LOC110508983
TU2433533 other downstream 145223 31711608 ~ 31737492 (-) True LOC110508968
TU2433312 other downstream 559351 31319341 ~ 31323364 (-) False G2128242
TU2433313 other downstream 559351 31319341 ~ 31323364 (-) True G2128242
TU2433314 other downstream 562092 31319283 ~ 31320623 (-) False G2128242
TU2433286 other downstream 638023 31244091 ~ 31244692 (-) True G2128216
TU2434105 other upstream 139918 32023058 ~ 32028558 (-) False LOC110508982
TU2434125 other upstream 139918 32023058 ~ 32028558 (-) False LOC110508982
TU2434163 other upstream 178909 32062049 ~ 32165022 (-) False asip2b
TU2434159 other upstream 273892 32157032 ~ 32165022 (-) False asip2b
TU2434160 other upstream 273892 32157032 ~ 32165022 (-) False asip2b

Expression Profile