RNA id: TU2435755



Basic Information


Item Value
RNA id TU2435755
length 206
lncRNA type intronic
GC content 0.40
exon number 1
gene id G2130272
representative True

Chromosome Information


Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 33195873 ~ 33196078 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


TATCCAGGCTTTTGTAATGAAGAACATTTCTGCTGTTTGATATGCAGTTATGGGGTAGTCGCGTGCCATTCTTTTCTACGAGCATTTTTCTATCGTGCAGAGTTGAAAGTCATCACATGTGTGTACTGTGTGCAACTGTGATCTTGTAGAtgagacaatgtgtgtgtgtgtttgtgtatagacAAAACTCTCTATTGATCCAAGAG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU2435751 lncRNA downstream 15790 33179884 ~ 33180083 (-) True G2130268
TU2435750 lncRNA downstream 16696 33178880 ~ 33179177 (-) True G2130267
TU2435742 lncRNA downstream 24294 33171330 ~ 33171579 (-) True G2130260
TU2435740 lncRNA downstream 27748 33167926 ~ 33168125 (-) True G2130258
TU2435716 lncRNA downstream 63986 33131596 ~ 33131887 (-) True G2130241
TU2435758 lncRNA upstream 8110 33204188 ~ 33205306 (-) True G2130275
TU2435759 lncRNA upstream 9864 33205942 ~ 33206509 (-) True G2130276
TU2435760 lncRNA upstream 10688 33206766 ~ 33209118 (-) True G2130277
TU2435761 lncRNA upstream 17290 33213368 ~ 33213796 (-) True G2130278
TU2435769 lncRNA upstream 31080 33227158 ~ 33255976 (-) True G2130286
XM_036966337.1 mRNA downstream 42459 33150005 ~ 33153414 (-) True LOC118944830
NM_001124640.1 mRNA downstream 222005 32968949 ~ 32973868 (-) True rgs18
XM_021588655.2 mRNA downstream 231721 32962496 ~ 32964152 (-) True LOC110508225
NM_001165154.2 mRNA downstream 238567 32954950 ~ 32957306 (-) True rgs1
XM_021589963.2 mRNA downstream 247361 32944542 ~ 32948512 (-) True LOC110509023
XM_036966876.1 mRNA upstream 82476 33278554 ~ 33307172 (-) False LOC110508227
XM_036966878.1 mRNA upstream 82476 33278554 ~ 33307172 (-) False LOC110508227
XM_036966880.1 mRNA upstream 82476 33278554 ~ 33307172 (-) False LOC110508227
XM_036966881.1 mRNA upstream 82476 33278554 ~ 33307172 (-) False LOC110508227
XM_036966879.1 mRNA upstream 82476 33278554 ~ 33307293 (-) True LOC110508227
TU2434271 other downstream 965659 32228406 ~ 32230214 (-) True LOC110508997
TU2434163 other downstream 1030851 32062049 ~ 32165022 (-) False asip2b
TU2434159 other downstream 1030851 32157032 ~ 32165022 (-) False asip2b
TU2434160 other downstream 1030851 32157032 ~ 32165022 (-) False asip2b
TU2434125 other downstream 1167315 32023058 ~ 32028558 (-) False LOC110508982
TU2435888 other upstream 202469 33398547 ~ 33399084 (-) True G2130393
TU2436339 other upstream 844128 34040206 ~ 34066665 (-) True G2130771
TU2436349 other upstream 845360 34041438 ~ 34068073 (-) True G2130780
TU2436338 other upstream 845491 34041569 ~ 34042565 (-) False LOC110509052
TU2436347 other upstream 848612 34044690 ~ 34058270 (-) True LOC110509052

Expression Profile