RNA id: TU2435877



Basic Information


Item Value
RNA id TU2435877
length 216
lncRNA type inter_gene
GC content 0.45
exon number 2
gene id G2130382
representative True

Chromosome Information


Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 33383805 ~ 33384077 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


TTGGTTATGGCTTGGTTATGGCTTGGTTATGGTTTGGTTATGGCTTGGTTATGGTggggtttggcttggaaaggtttatTCGCCTGGTCATAGACAGCTGTTGTGTTCACAAGTGAAGttcaaggaatcaTGCAATGaggcagagggagaaagaaagagggtcaGTGAGGAAGTGACtggcagagggagaaagaaagattaAAATGCAAGGTGGAC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU2435745 lncRNA downstream 109050 33272894 ~ 33274755 (-) True G2130263
TU2435746 lncRNA downstream 116610 33261645 ~ 33267195 (-) True G2130264
TU2435769 lncRNA downstream 127829 33227158 ~ 33255976 (-) True G2130286
TU2435778 lncRNA downstream 144459 33239022 ~ 33239346 (-) True G2130295
TU2435771 lncRNA downstream 153423 33229961 ~ 33230382 (-) True G2130288
TU2435879 lncRNA upstream 3451 33387528 ~ 33387751 (-) True G2130384
TU2435880 lncRNA upstream 3955 33388032 ~ 33388359 (-) True G2130385
TU2435882 lncRNA upstream 5955 33390032 ~ 33390255 (-) True G2130387
TU2435889 lncRNA upstream 15658 33399735 ~ 33400010 (-) True G2130394
TU2435893 lncRNA upstream 28891 33412968 ~ 33413363 (-) True G2130398
XM_036966871.1 mRNA downstream 2605 33313433 ~ 33381200 (-) True LOC110509030
XM_036966872.1 mRNA downstream 3139 33313433 ~ 33380666 (-) False LOC110509030
XM_036966873.1 mRNA downstream 3140 33313433 ~ 33380665 (-) False LOC110509030
XM_036966874.1 mRNA downstream 3140 33313433 ~ 33380665 (-) False LOC110509030
XM_036966875.1 mRNA downstream 3140 33313433 ~ 33380665 (-) False LOC110509030
XM_036966733.1 mRNA upstream 22596 33406673 ~ 33485169 (-) False LOC110509034
XM_036966732.1 mRNA upstream 22596 33406673 ~ 33514461 (-) False LOC110509034
XM_036966734.1 mRNA upstream 22600 33406677 ~ 33422858 (-) False LOC110509034
XM_021589978.2 mRNA upstream 134627 33518704 ~ 33526697 (-) True LOC110509036
XM_021589979.2 mRNA upstream 170940 33555017 ~ 33562140 (-) True LOC110509037
TU2434271 other downstream 1153591 32228406 ~ 32230214 (-) True LOC110508997
TU2434163 other downstream 1218783 32062049 ~ 32165022 (-) False asip2b
TU2434159 other downstream 1218783 32157032 ~ 32165022 (-) False asip2b
TU2434160 other downstream 1218783 32157032 ~ 32165022 (-) False asip2b
TU2434125 other downstream 1355247 32023058 ~ 32028558 (-) False LOC110508982
TU2435888 other upstream 14470 33398547 ~ 33399084 (-) True G2130393
TU2436339 other upstream 656129 34040206 ~ 34066665 (-) True G2130771
TU2436349 other upstream 657361 34041438 ~ 34068073 (-) True G2130780
TU2436338 other upstream 657492 34041569 ~ 34042565 (-) False LOC110509052
TU2436347 other upstream 660613 34044690 ~ 34058270 (-) True LOC110509052

Expression Profile