RNA id: TU2435990



Basic Information


Item Value
RNA id TU2435990
length 385
lncRNA type intronic
GC content 0.35
exon number 2
gene id G2130484
representative True

Chromosome Information


Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 33593714 ~ 33594568 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


TGACTTTAACTATGGTGTATAGCTACAGACATGACTTTAACTATGGTGTATAGCTACAGACATGACTTTAACTATGGTGTTATAGCTACAGACATGACTTTAACTATGGTGTTATAGCTACAGACATGACTTTAACTATGGTGTTATAGCTACAGACATGACTTTAACTATGGTGTTATAGCTACAGACATGACTAACTATGGTGTTATAGCTACAGACATGACTTTAACTATGGTGTTATAGCTACAGACATGACTAACTATGGTGTATAGCTACAGACATGACTTTAACTATGGTGTTATAGCTACAGACATGACTTTAACTATGGTGTTATAGCTACAGACATGACTAACTATGGTGTATAGCTACAGACATGACTTTAACT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU2435980 lncRNA downstream 15513 33577792 ~ 33578201 (-) True G2130476
TU2435965 lncRNA downstream 39620 33552883 ~ 33554094 (-) True G2130462
TU2435833 lncRNA downstream 143171 33440402 ~ 33450543 (-) True LOC110509034
TU2435904 lncRNA downstream 160661 33432755 ~ 33433053 (-) True G2130409
TU2435899 lncRNA downstream 166859 33426418 ~ 33426855 (-) True G2130404
TU2436016 lncRNA upstream 37265 33631833 ~ 33632058 (-) True G2130506
TU2436018 lncRNA upstream 40995 33635563 ~ 33635926 (-) True G2130508
TU2436024 lncRNA upstream 54908 33649476 ~ 33649702 (-) True G2130514
TU2436034 lncRNA upstream 62808 33657376 ~ 33657608 (-) True G2130519
TU2436044 lncRNA upstream 78833 33673401 ~ 33674141 (-) True G2130528
trnav-cac-89 mRNA downstream 11082 33582560 ~ 33582632 (-) True trnav-cac-89
XM_021589981.2 mRNA downstream 17723 33572110 ~ 33575991 (-) True LOC110509038
XM_021589980.2 mRNA downstream 17724 33572110 ~ 33575990 (-) False LOC110509038
LOC110508228 mRNA downstream 25111 33563935 ~ 33568603 (-) True LOC110508228
XM_021589979.2 mRNA downstream 31574 33555017 ~ 33562140 (-) True LOC110509037
XM_036966528.1 mRNA upstream 31883 33626451 ~ 33797286 (-) True LOC110508229
XM_036966338.1 mRNA upstream 319782 33914350 ~ 33916205 (-) True LOC118944832
XM_021589988.2 mRNA upstream 359129 33953697 ~ 33972737 (-) False LOC110509043
XM_021589989.2 mRNA upstream 359129 33953697 ~ 33972737 (-) True LOC110509043
XM_036966941.1 mRNA upstream 383008 33977576 ~ 33985115 (-) False LOC110509045
TU2435888 other downstream 194630 33398547 ~ 33399084 (-) True G2130393
TU2434271 other downstream 1363500 32228406 ~ 32230214 (-) True LOC110508997
TU2434163 other downstream 1428692 32062049 ~ 32165022 (-) False asip2b
TU2436339 other upstream 445638 34040206 ~ 34066665 (-) True G2130771
TU2436349 other upstream 446870 34041438 ~ 34068073 (-) True G2130780
TU2436338 other upstream 447001 34041569 ~ 34042565 (-) False LOC110509052
TU2436347 other upstream 450122 34044690 ~ 34058270 (-) True LOC110509052
TU2437325 other upstream 891301 34485869 ~ 34486176 (-) True G2131621

Expression Profile