RNA id: TU2437203



Basic Information


Item Value
RNA id TU2437203
length 618
lncRNA type intronic
GC content 0.36
exon number 3
gene id G2131510
representative False

Chromosome Information


Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 34845298 ~ 34846409 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


TTATACTGCGGttatactgcactatactgccgttatactgtactatactgtGGTTATACTGCATTATACTGCGGttatactgcactatactgccgttatactgtactatactgtggtTATACTGCATTATACTGcggttatactgtactatactggggTTATACTGCattatactgcagttatactgcactatactgcagttatactgtggTTATATTGCGGTTATACTGCATTATACTGTGGTTATACTGCATTATACTGCGGttatactgcactatactgctgttatactgtactatactgtggtTATACTGCGGTTATACTGCATTATattgcagttatactgtactatactgcggttatactgtactacactatactatactgcacCATACTGCtgttatactgcactacactactatactgcagttatactgctgttatactgtactatactgcactatactgcattaatactgtactatactgcggttatactgcactatactgtgctatactgccattatactgtactatactgtagttatactgcgaTCTAACAGCAATCTATTTTCATAAGCAAGATCATCTATATCAAGACGCTGACAATATTTAGTT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU2437148 lncRNA upstream 3076 34769657 ~ 34842222 (+) True G2131461
TU2437177 lncRNA upstream 30609 34811977 ~ 34814689 (+) False LOC110509077
TU2437178 lncRNA upstream 30609 34811977 ~ 34814689 (+) True LOC110509077
TU2437161 lncRNA upstream 58982 34785005 ~ 34786316 (+) True G2131472
TU2437151 lncRNA upstream 71162 34770922 ~ 34774136 (+) True G2131462
TU2437231 lncRNA downstream 57386 34903795 ~ 34904100 (+) True G2131536
TU2437233 lncRNA downstream 64701 34911110 ~ 34912582 (+) True G2131538
TU2437235 lncRNA downstream 67027 34913436 ~ 34945186 (+) True G2131540
TU2437246 lncRNA downstream 87995 34934404 ~ 35018056 (+) True G2131551
TU2437286 lncRNA downstream 149929 34996338 ~ 35033590 (+) True G2131587
XR_002471398.2 mRNA upstream 30579 34811894 ~ 34814719 (+) False LOC110509077
XR_002471397.2 mRNA upstream 30579 34811895 ~ 34814719 (+) False LOC110509077
XM_036966434.1 mRNA upstream 41713 34796732 ~ 34803585 (+) False LOC110509069
XM_036966435.1 mRNA upstream 41713 34796732 ~ 34803585 (+) False LOC110509069
XM_036966436.1 mRNA upstream 41713 34796732 ~ 34803585 (+) False LOC110509069
XM_021590036.2 mRNA downstream 52118 34898527 ~ 34903418 (+) True si:ch211-252f13.5
XM_021590040.2 mRNA downstream 90117 34936526 ~ 34939328 (+) True LOC110509083
XM_036966464.1 mRNA downstream 233089 35079498 ~ 35088111 (+) True LOC110509084
trnak-uuu-132 mRNA downstream 286379 35132788 ~ 35132860 (+) True trnak-uuu-132
trnak-uuu-133 mRNA downstream 287694 35134103 ~ 35134175 (+) True trnak-uuu-133
TU2437109 other upstream 61880 34702206 ~ 34783418 (+) True G2131426
TU2437076 other upstream 157658 34687271 ~ 34687640 (+) True G2131416
TU2437020 other upstream 240345 34603485 ~ 34604953 (+) True G2131383
TU2436600 other upstream 471288 34370861 ~ 34374010 (+) True LOC110508236
TU2436307 other upstream 776204 34061910 ~ 34069094 (+) True G2130749
TU2437711 other downstream 245290 35091699 ~ 35093034 (+) True G2131933
TU2438124 other downstream 853437 35699846 ~ 35700235 (+) True G2132291
TU2438299 other downstream 1127030 35973439 ~ 35975132 (+) True LOC110508289
TU2438402 other downstream 1492685 36339094 ~ 36364994 (+) True G2132519
TU2438499 other downstream 1519147 36365556 ~ 36369967 (+) True G2132611

Expression Profile