RNA id: TU2437565



Basic Information


Item Value
RNA id TU2437565
length 824
lncRNA type intronic
GC content 0.40
exon number 3
gene id G2131809
representative True

Chromosome Information


Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 34853560 ~ 34854537 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


GTGTAATCATTGGTTAACAGAAGAGACAGTAAGAACTACAGCAGTAACAGGGTGTAATCATTGGTTAACAGAAGAAACAATAAGAACTACAGCAGTAACAGGGTGTAATCATTGGttaacagaagagacagagagaactacaGCAGTAACAGGGTGTAATCATTGGttaacagaagagacagagagagaactacagcaGTAACAGGTGTAATCATTGGttaacagaagagacagagagagaactacagcaGTAACAGGGTGTAATCATTGGTTAACAGAAGAAACAATAAGAACTACAGCAGTAACAGGGTGTAATCATTGGTTAACAGAAGAGACAGTAAGAACTACAGCAGTAACGGGGTGTAATCATTGGTTAACAGAAGAGACAGTAAGAACTACAGCAGTAACAGGGTGTAATCATTGGTTAACAGAAGAGACAGTAAGAACTACAGCAGTAACGGGGTGTAATCATTGGTTAACAGAAGAGACAGTAAGAACTACAGCAGTAACAGGGTGTAATCATTGGttaacagaagagacagagagagaactacagcaGTAACAGGGTGTAATCATTGGTTAACAGAAGAGACAGTAAGAACTACAGCAGTAACAGGGTGTAATCATTGGttaacagaagagacagagagagaactacagcaGTAACAGGGTGTAATCATTGGttaacagaagagacagagagaactacaGCAGTAACAGGGTGTAATCATTGGTTAACAGAAGAGACAGTAAGAACTACAGCAGTAACAGGTGTAATCATTGGttaacagaagagacagagagagaactgcacaGTGCAGTTC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU2437484 lncRNA downstream 168292 34684981 ~ 34685268 (-) True G2131736
TU2437483 lncRNA downstream 171078 34682278 ~ 34682482 (-) True G2131735
TU2437442 lncRNA downstream 233636 34619644 ~ 34619924 (-) True G2131702
TU2437439 lncRNA downstream 243725 34609030 ~ 34609835 (-) True G2131699
TU2437436 lncRNA downstream 256037 34597255 ~ 34597523 (-) True G2131696
TU2437574 lncRNA upstream 12128 34866665 ~ 34867243 (-) True G2131816
TU2437593 lncRNA upstream 20517 34875054 ~ 34875690 (-) True G2131824
TU2437605 lncRNA upstream 37348 34891885 ~ 34892090 (-) True G2131836
TU2437620 lncRNA upstream 81971 34936508 ~ 34945229 (-) True G2131851
TU2437623 lncRNA upstream 102122 34956659 ~ 34967039 (-) True LOC110509081
XM_036966651.1 mRNA downstream 29025 34812717 ~ 34824535 (-) False LOC110509075
XM_036966649.1 mRNA downstream 29031 34812717 ~ 34824529 (-) False LOC110509075
XM_036966652.1 mRNA downstream 29031 34812717 ~ 34824529 (-) False LOC110509075
XM_036966653.1 mRNA downstream 29031 34816267 ~ 34824529 (-) True LOC110509075
XM_036966439.1 mRNA downstream 46746 34773755 ~ 34806814 (-) True LOC110509071
XM_036966925.1 mRNA upstream 13976 34868513 ~ 34888930 (-) True LOC110508238
XM_021590037.2 mRNA upstream 56558 34911095 ~ 34921612 (-) False anxa13l
XM_021590038.2 mRNA upstream 56558 34911095 ~ 34921612 (-) True anxa13l
XM_036966584.1 mRNA upstream 70849 34925386 ~ 35056378 (-) False LOC110509081
XM_021590044.2 mRNA upstream 237685 35092222 ~ 35105019 (-) True LOC110509086
TU2437347 other downstream 335431 34516522 ~ 34518129 (-) False G2131641
TU2437349 other downstream 335431 34516522 ~ 34518129 (-) True G2131641
TU2437325 other downstream 367384 34485869 ~ 34486176 (-) True G2131621
TU2436347 other downstream 795290 34044690 ~ 34058270 (-) True LOC110509052
TU2436338 other downstream 810995 34041569 ~ 34042565 (-) False LOC110509052
TU2438804 other upstream 1150952 36005489 ~ 36017832 (-) False lyrm4
TU2438803 other upstream 1161525 36016062 ~ 36017832 (-) True lyrm4
TU2438849 other upstream 1169243 36023780 ~ 36025201 (-) False LOC118944844
TU2438850 other upstream 1169253 36023790 ~ 36025201 (-) True LOC118944844
TU2438948 other upstream 1369676 36224213 ~ 36225379 (-) True G2132971

Expression Profile