RNA id: TU2437605



Basic Information


Item Value
RNA id TU2437605
length 206
lncRNA type inter_gene
GC content 0.39
exon number 1
gene id G2131836
representative True

Chromosome Information


Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 34891885 ~ 34892090 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


agaaaacactctaaagttttccaatactgtcaaaatattgtctttgagtataacataactgatattgcaggcgaaaacctgaggaaaatccaaccaggaagtgctgtttttctgaaactactctgttccattgcaagcctatcctccatttaaaaggatatcaaccagattcctttccctatggcttccacagggtgtgaacagtc

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU2437593 lncRNA downstream 16195 34875054 ~ 34875690 (-) True G2131824
TU2437574 lncRNA downstream 24642 34866665 ~ 34867243 (-) True G2131816
TU2437565 lncRNA downstream 37348 34853560 ~ 34854537 (-) True G2131809
TU2437484 lncRNA downstream 206617 34684981 ~ 34685268 (-) True G2131736
TU2437483 lncRNA downstream 209403 34682278 ~ 34682482 (-) True G2131735
TU2437620 lncRNA upstream 44418 34936508 ~ 34945229 (-) True G2131851
TU2437623 lncRNA upstream 64569 34956659 ~ 34967039 (-) True LOC110509081
TU2437644 lncRNA upstream 85215 34977305 ~ 34977703 (-) True G2131873
TU2437651 lncRNA upstream 98920 34991010 ~ 34991812 (-) True G2131880
TU2437681 lncRNA upstream 149876 35041966 ~ 35042678 (-) True G2131906
XM_036966925.1 mRNA downstream 2955 34868513 ~ 34888930 (-) True LOC110508238
XM_036966651.1 mRNA downstream 67350 34812717 ~ 34824535 (-) False LOC110509075
XM_036966649.1 mRNA downstream 67356 34812717 ~ 34824529 (-) False LOC110509075
XM_036966652.1 mRNA downstream 67356 34812717 ~ 34824529 (-) False LOC110509075
XM_036966653.1 mRNA downstream 67356 34816267 ~ 34824529 (-) True LOC110509075
XM_021590037.2 mRNA upstream 19005 34911095 ~ 34921612 (-) False anxa13l
XM_021590038.2 mRNA upstream 19005 34911095 ~ 34921612 (-) True anxa13l
XM_036966584.1 mRNA upstream 33296 34925386 ~ 35056378 (-) False LOC110509081
XM_021590044.2 mRNA upstream 200132 35092222 ~ 35105019 (-) True LOC110509086
trnaw-cca-62 mRNA upstream 240465 35132555 ~ 35132626 (-) True trnaw-cca-62
TU2437347 other downstream 373756 34516522 ~ 34518129 (-) False G2131641
TU2437349 other downstream 373756 34516522 ~ 34518129 (-) True G2131641
TU2437325 other downstream 405709 34485869 ~ 34486176 (-) True G2131621
TU2436347 other downstream 833615 34044690 ~ 34058270 (-) True LOC110509052
TU2436338 other downstream 849320 34041569 ~ 34042565 (-) False LOC110509052
TU2438804 other upstream 1113399 36005489 ~ 36017832 (-) False lyrm4
TU2438803 other upstream 1123972 36016062 ~ 36017832 (-) True lyrm4
TU2438849 other upstream 1131690 36023780 ~ 36025201 (-) False LOC118944844
TU2438850 other upstream 1131700 36023790 ~ 36025201 (-) True LOC118944844
TU2438948 other upstream 1332123 36224213 ~ 36225379 (-) True G2132971

Expression Profile