RNA id: TU2437651



Basic Information


Item Value
RNA id TU2437651
length 299
lncRNA type intronic
GC content 0.32
exon number 3
gene id G2131880
representative True

Chromosome Information


Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 34991010 ~ 34991812 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


aatgcattatgatgcaggtacaatacattatgatgcaggtataatacattatgatgcaggtataatacattatgatgcagagttaatgcattatgatgcaggtataatgcattatgatgcatagttaatgcattatgatgcagagttaatgcattatgatgcaggtataatgcattatgatgcaggtataatgcattatgatgcaggtataatgcattatgatgcaggtataatgcattatgatgcagagttaatgcattatgatgcagagttaatgcattatgatgcaggtataatac

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU2437644 lncRNA downstream 13307 34977305 ~ 34977703 (-) True G2131873
TU2437623 lncRNA downstream 23971 34956659 ~ 34967039 (-) True LOC110509081
TU2437620 lncRNA downstream 45781 34936508 ~ 34945229 (-) True G2131851
TU2437605 lncRNA downstream 98920 34891885 ~ 34892090 (-) True G2131836
TU2437593 lncRNA downstream 115320 34875054 ~ 34875690 (-) True G2131824
TU2437681 lncRNA upstream 50154 35041966 ~ 35042678 (-) True G2131906
TU2437729 lncRNA upstream 76706 35068518 ~ 35069139 (-) True G2131950
TU2437753 lncRNA upstream 120184 35111996 ~ 35112449 (-) True G2131974
TU2437755 lncRNA upstream 121881 35113693 ~ 35113937 (-) True G2131976
TU2437769 lncRNA upstream 131588 35123400 ~ 35125723 (-) True G2131990
XM_021590037.2 mRNA downstream 69398 34911095 ~ 34921612 (-) False anxa13l
XM_021590038.2 mRNA downstream 69398 34911095 ~ 34921612 (-) True anxa13l
XM_036966925.1 mRNA downstream 102080 34868513 ~ 34888930 (-) True LOC110508238
XM_036966651.1 mRNA downstream 166475 34812717 ~ 34824535 (-) False LOC110509075
XM_021590044.2 mRNA upstream 100410 35092222 ~ 35105019 (-) True LOC110509086
trnaw-cca-62 mRNA upstream 140743 35132555 ~ 35132626 (-) True trnaw-cca-62
trnaw-cca-63 mRNA upstream 142051 35133863 ~ 35133934 (-) True trnaw-cca-63
trnaw-cca-64 mRNA upstream 143610 35135422 ~ 35135493 (-) True trnaw-cca-64
trnaw-cca-65 mRNA upstream 145169 35136981 ~ 35137052 (-) True trnaw-cca-65
TU2437347 other downstream 472881 34516522 ~ 34518129 (-) False G2131641
TU2437349 other downstream 472881 34516522 ~ 34518129 (-) True G2131641
TU2437325 other downstream 504834 34485869 ~ 34486176 (-) True G2131621
TU2436347 other downstream 932740 34044690 ~ 34058270 (-) True LOC110509052
TU2436338 other downstream 948445 34041569 ~ 34042565 (-) False LOC110509052
TU2438804 other upstream 1013677 36005489 ~ 36017832 (-) False lyrm4
TU2438803 other upstream 1024250 36016062 ~ 36017832 (-) True lyrm4
TU2438849 other upstream 1031968 36023780 ~ 36025201 (-) False LOC118944844
TU2438850 other upstream 1031978 36023790 ~ 36025201 (-) True LOC118944844
TU2438948 other upstream 1232401 36224213 ~ 36225379 (-) True G2132971

Expression Profile