RNA id: TU2437769



Basic Information


Item Value
RNA id TU2437769
length 204
lncRNA type inter_gene
GC content 0.50
exon number 2
gene id G2131990
representative True

Chromosome Information


Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 35123400 ~ 35125723 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


ctgtagctctctctctctctttctctctgtatctctctctccctctccctcgctctctcttgtttcctgctctctctctctctctgtagctctctctctctctctctctctctctctctctctctctctctctctctgtagctctctctctctctagctctctctctctctctctctctctcttgctctctctctctgtagctc

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU2437755 lncRNA downstream 9463 35113693 ~ 35113937 (-) True G2131976
TU2437753 lncRNA downstream 10951 35111996 ~ 35112449 (-) True G2131974
TU2437729 lncRNA downstream 54261 35068518 ~ 35069139 (-) True G2131950
TU2437681 lncRNA downstream 80722 35041966 ~ 35042678 (-) True G2131906
TU2437651 lncRNA downstream 131588 34991010 ~ 34991812 (-) True G2131880
TU2437798 lncRNA upstream 130964 35256687 ~ 35257074 (-) True G2132010
TU2437804 lncRNA upstream 209155 35334878 ~ 35335159 (-) True G2132016
TU2437806 lncRNA upstream 230701 35356424 ~ 35356686 (-) True G2132018
TU2437876 lncRNA upstream 260201 35385924 ~ 35386152 (-) True G2132074
TU2437885 lncRNA upstream 271294 35397017 ~ 35397255 (-) True G2132083
XM_021590044.2 mRNA downstream 18381 35092222 ~ 35105019 (-) True LOC110509086
XM_036966584.1 mRNA downstream 67022 34925386 ~ 35056378 (-) False LOC110509081
XM_021590037.2 mRNA downstream 201788 34911095 ~ 34921612 (-) False anxa13l
XM_021590038.2 mRNA downstream 201788 34911095 ~ 34921612 (-) True anxa13l
XM_036966925.1 mRNA downstream 234470 34868513 ~ 34888930 (-) True LOC110508238
trnaw-cca-62 mRNA upstream 6832 35132555 ~ 35132626 (-) True trnaw-cca-62
trnaw-cca-63 mRNA upstream 8140 35133863 ~ 35133934 (-) True trnaw-cca-63
trnaw-cca-64 mRNA upstream 9699 35135422 ~ 35135493 (-) True trnaw-cca-64
trnaw-cca-65 mRNA upstream 11258 35136981 ~ 35137052 (-) True trnaw-cca-65
trnaw-cca-66 mRNA upstream 12562 35138285 ~ 35138356 (-) True trnaw-cca-66
TU2437347 other downstream 605271 34516522 ~ 34518129 (-) False G2131641
TU2437349 other downstream 605271 34516522 ~ 34518129 (-) True G2131641
TU2437325 other downstream 637224 34485869 ~ 34486176 (-) True G2131621
TU2436347 other downstream 1065130 34044690 ~ 34058270 (-) True LOC110509052
TU2436338 other downstream 1080835 34041569 ~ 34042565 (-) False LOC110509052
TU2438804 other upstream 879766 36005489 ~ 36017832 (-) False lyrm4
TU2438803 other upstream 890339 36016062 ~ 36017832 (-) True lyrm4
TU2438849 other upstream 898057 36023780 ~ 36025201 (-) False LOC118944844
TU2438850 other upstream 898067 36023790 ~ 36025201 (-) True LOC118944844
TU2438948 other upstream 1098490 36224213 ~ 36225379 (-) True G2132971

Expression Profile