Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU2438696 |
| length | 489 |
| lncRNA type | inter_gene |
| GC content | 0.44 |
| exon number | 2 |
| gene id | G2132792 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048592.1 |
| NCBI id | CM023246.2 |
| chromosome length | 43716683 |
| location | 35850482 ~ 35852434 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | description |
|---|
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU2438733 | lncRNA | downstream | 1959 | 35848238 ~ 35848523 (-) | True | G2132827 |
| TU2438731 | lncRNA | downstream | 4116 | 35846040 ~ 35846366 (-) | True | G2132825 |
| TU2438730 | lncRNA | downstream | 5844 | 35844366 ~ 35844638 (-) | True | G2132824 |
| TU2438717 | lncRNA | downstream | 30397 | 35819775 ~ 35820085 (-) | True | G2132812 |
| TU2438644 | lncRNA | downstream | 67821 | 35782170 ~ 35782661 (-) | True | tfr1a |
| TU2438748 | lncRNA | upstream | 13414 | 35865848 ~ 35871224 (-) | False | LOC110509091 |
| TU2438742 | lncRNA | upstream | 14047 | 35866481 ~ 35871109 (-) | False | LOC110509091 |
| TU2438750 | lncRNA | upstream | 14047 | 35866481 ~ 35871109 (-) | False | LOC110509091 |
| TU2438754 | lncRNA | upstream | 14047 | 35866481 ~ 35871109 (-) | False | LOC110509091 |
| TU2438756 | lncRNA | upstream | 14047 | 35866481 ~ 35871109 (-) | False | LOC110509091 |
| XM_036966685.1 | mRNA | downstream | 8460 | 35833983 ~ 35842022 (-) | True | LOC110509089 |
| XM_036966684.1 | mRNA | downstream | 8491 | 35833983 ~ 35841991 (-) | False | LOC110509089 |
| XM_021590050.2 | mRNA | downstream | 37035 | 35782149 ~ 35813447 (-) | False | tfr1a |
| XM_021590049.2 | mRNA | downstream | 37337 | 35782149 ~ 35813145 (-) | False | tfr1a |
| XM_021590052.2 | mRNA | downstream | 38410 | 35782149 ~ 35812072 (-) | False | tfr1a |
| XM_036966073.1 | mRNA | upstream | 17722 | 35870156 ~ 35925783 (-) | False | LOC110509091 |
| XM_021590059.2 | mRNA | upstream | 150419 | 36002853 ~ 36013047 (-) | False | rpp40 |
| XM_021590060.2 | mRNA | upstream | 150419 | 36002853 ~ 36013047 (-) | True | rpp40 |
| XM_036966844.1 | mRNA | upstream | 163652 | 36016086 ~ 36017873 (-) | False | lyrm4 |
| XM_036966480.1 | mRNA | upstream | 171280 | 36023714 ~ 36025735 (-) | False | LOC118944844 |
| TU2437347 | other | downstream | 1332353 | 34516522 ~ 34518129 (-) | False | G2131641 |
| TU2437349 | other | downstream | 1332353 | 34516522 ~ 34518129 (-) | True | G2131641 |
| TU2437325 | other | downstream | 1364306 | 34485869 ~ 34486176 (-) | True | G2131621 |
| TU2436347 | other | downstream | 1792212 | 34044690 ~ 34058270 (-) | True | LOC110509052 |
| TU2436338 | other | downstream | 1807917 | 34041569 ~ 34042565 (-) | False | LOC110509052 |
| TU2438804 | other | upstream | 153055 | 36005489 ~ 36017832 (-) | False | lyrm4 |
| TU2438803 | other | upstream | 163628 | 36016062 ~ 36017832 (-) | True | lyrm4 |
| TU2438849 | other | upstream | 171346 | 36023780 ~ 36025201 (-) | False | LOC118944844 |
| TU2438850 | other | upstream | 171356 | 36023790 ~ 36025201 (-) | True | LOC118944844 |
| TU2438948 | other | upstream | 371779 | 36224213 ~ 36225379 (-) | True | G2132971 |
