RNA id: TU2440685



Basic Information


Item Value
RNA id TU2440685
length 430
lncRNA type intronic
GC content 0.31
exon number 2
gene id G2134492
representative True

Chromosome Information


Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 37855825 ~ 37858565 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


ggtttgatagaactaatagaactgtagaatgggtttgatagaactaatagaactgtagaatgggtttaatagaactaatagaactgtagaataggtgtaatagaactgtagaatgggtttgatagaactaatagaactgtagaatgggtttgatagaactaatagaactgtagaatgggtttgatagaactaatagaactgtagaataggtttaatagaactgtagaatgggtttgatagaactaatagaactgtagaatgggtttgatagaactaatagaactgtagaatgggtttaatagaactaatagaactgtagaatgggtttgatagaactaatagaactgtagaatgggtttaatagaactaatagaactgtagaatgggtttgatagaactaatagaactgtagaatgggtttaatagaact

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU2440683 lncRNA downstream 1448 37850298 ~ 37854377 (-) True G2134490
TU2440682 lncRNA downstream 8768 37842639 ~ 37847057 (-) True G2134489
TU2440671 lncRNA downstream 18598 37807077 ~ 37837227 (-) False G2134486
TU2440668 lncRNA downstream 18598 37815556 ~ 37837227 (-) True G2134486
TU2440679 lncRNA downstream 43319 37804739 ~ 37812506 (-) False G2134486
TU2440690 lncRNA upstream 1763 37860328 ~ 37861383 (-) True G2134496
TU2440698 lncRNA upstream 16247 37874812 ~ 37882010 (-) True G2134502
TU2440699 lncRNA upstream 16747 37875312 ~ 37883306 (-) True G2134503
TU2440719 lncRNA upstream 52449 37911014 ~ 37941146 (-) True G2134522
TU2440745 lncRNA upstream 111550 37970115 ~ 37970347 (-) True G2134546
XM_036966375.1 mRNA downstream 250945 37578708 ~ 37604880 (-) False LOC110509123
XM_021590092.2 mRNA downstream 294615 37546812 ~ 37561210 (-) True inhbab
XM_021590091.2 mRNA downstream 382277 37471456 ~ 37473548 (-) True LOC110509120
XM_036966595.1 mRNA downstream 384981 37337525 ~ 37470844 (-) True fbxl7
XM_021590087.2 mRNA downstream 430630 37337525 ~ 37425195 (-) False fbxl7
XM_036966303.1 mRNA upstream 716152 38574717 ~ 38625443 (-) False LOC110509132
XM_036966302.1 mRNA upstream 716152 38574717 ~ 38625444 (-) False LOC110509132
XM_036966304.1 mRNA upstream 716152 38574717 ~ 38637568 (-) False LOC110509132
XM_036966300.1 mRNA upstream 716152 38574717 ~ 38644749 (-) False LOC110509132
XM_036966299.1 mRNA upstream 716152 38574717 ~ 38644750 (-) True LOC110509132
TU2439020 other downstream 1298372 36556500 ~ 36557453 (-) True LOC110509111
TU2438987 other downstream 1592495 36263002 ~ 36263330 (-) True G2133007
TU2438933 other downstream 1606050 36235515 ~ 36249775 (-) False G2132966
TU2438943 other downstream 1606050 36238230 ~ 36249775 (-) True G2132966
TU2438948 other downstream 1630446 36224213 ~ 36225379 (-) True G2132971
TU2440825 other upstream 269564 38128129 ~ 38130407 (-) True G2134625
TU2441345 other upstream 661006 38519571 ~ 38526920 (-) True G2135034
TU2442402 other upstream 1146896 39005461 ~ 39006050 (-) True G2135837
TU2442821 other upstream 1945230 39803795 ~ 39829179 (-) True LOC110509145
TU2442908 other upstream 2084588 39943153 ~ 39945834 (-) True G2136189

Expression Profile