RNA id: TU2440698



Basic Information


Item Value
RNA id TU2440698
length 383
lncRNA type intronic
GC content 0.34
exon number 2
gene id G2134502
representative True

Chromosome Information


Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 37874812 ~ 37882010 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


atatactgctggtgtggtggtaatatggtcataatatatgtcattatatactgctggtgtggtggtaatatggtcataatatactgatggtgtggtggtaatatggtcataatatactgctggtgtggtggtaatatggtcataatatatgtcattatatactgctggtgtggtggtaatatggtcataatatatgtcataatatactgatggtgtggtggtaatatggtcataatatatgtcataatatactgatggtgtggtggtaatatggtcataatatactgatggtgtggtggtaatatggtcataatatactgttggtgtggtggtaatatggtcataatatactgttggtgtggtggtaatatggtcataatata

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU2440690 lncRNA downstream 13429 37860328 ~ 37861383 (-) True G2134496
TU2440685 lncRNA downstream 16247 37855825 ~ 37858565 (-) True G2134492
TU2440683 lncRNA downstream 20435 37850298 ~ 37854377 (-) True G2134490
TU2440682 lncRNA downstream 27755 37842639 ~ 37847057 (-) True G2134489
TU2440671 lncRNA downstream 37585 37807077 ~ 37837227 (-) False G2134486
TU2440719 lncRNA upstream 29004 37911014 ~ 37941146 (-) True G2134522
TU2440745 lncRNA upstream 88105 37970115 ~ 37970347 (-) True G2134546
TU2440747 lncRNA upstream 89417 37971427 ~ 37971633 (-) True G2134548
TU2440777 lncRNA upstream 149413 38031423 ~ 38032037 (-) True G2134578
TU2440781 lncRNA upstream 153972 38035982 ~ 38083851 (-) True G2134582
XM_036966375.1 mRNA downstream 269932 37578708 ~ 37604880 (-) False LOC110509123
XM_021590092.2 mRNA downstream 313602 37546812 ~ 37561210 (-) True inhbab
XM_021590091.2 mRNA downstream 401264 37471456 ~ 37473548 (-) True LOC110509120
XM_036966595.1 mRNA downstream 403968 37337525 ~ 37470844 (-) True fbxl7
XM_021590087.2 mRNA downstream 449617 37337525 ~ 37425195 (-) False fbxl7
XM_036966303.1 mRNA upstream 692707 38574717 ~ 38625443 (-) False LOC110509132
XM_036966302.1 mRNA upstream 692707 38574717 ~ 38625444 (-) False LOC110509132
XM_036966304.1 mRNA upstream 692707 38574717 ~ 38637568 (-) False LOC110509132
XM_036966300.1 mRNA upstream 692707 38574717 ~ 38644749 (-) False LOC110509132
XM_036966299.1 mRNA upstream 692707 38574717 ~ 38644750 (-) True LOC110509132
TU2439020 other downstream 1317359 36556500 ~ 36557453 (-) True LOC110509111
TU2438987 other downstream 1611482 36263002 ~ 36263330 (-) True G2133007
TU2438933 other downstream 1625037 36235515 ~ 36249775 (-) False G2132966
TU2438943 other downstream 1625037 36238230 ~ 36249775 (-) True G2132966
TU2438948 other downstream 1649433 36224213 ~ 36225379 (-) True G2132971
TU2440825 other upstream 246119 38128129 ~ 38130407 (-) True G2134625
TU2441345 other upstream 637561 38519571 ~ 38526920 (-) True G2135034
TU2442402 other upstream 1123451 39005461 ~ 39006050 (-) True G2135837
TU2442821 other upstream 1921785 39803795 ~ 39829179 (-) True LOC110509145
TU2442908 other upstream 2061143 39943153 ~ 39945834 (-) True G2136189

Expression Profile