Item | Value |
---|---|
RNA id | TCONS_00055757 |
length | 1655 |
RNA type | mRNA |
GC content | 0.47 |
exon number | 16 |
gene id | XLOC_028769 |
representative | True |
Item | Value |
---|---|
chromosome id | NC_007115.7 |
NCBI id | CM002888.2 |
chromosome length | 78093715 |
location | 22300330 ~ 22311610 (-) |
genome version | GRCz11_2017_zebrafish_Genome |
species | zebrafish (Danio rerio) |
id | name | namespace |
---|---|---|
GO:0030833 | regulation of actin filament polymerization | biological_process |
GO:0030041 | actin filament polymerization | biological_process |
GO:0030427 | site of polarized growth | cellular_component |
GO:0005884 | actin filament | cellular_component |
GO:0005886 | plasma membrane | cellular_component |
GO:0030864 | cortical actin cytoskeleton | cellular_component |
GO:0051015 | actin filament binding | molecular_function |
GO:0003779 | actin binding | molecular_function |
id | description |
---|---|
ZDB-GENE-030131-7191 | Predicted to enable actin filament binding activity. Predicted to be involved in regulation of actin filament polymerization. Predicted to act upstream of or within actin filament polymerization. Predicted to be active in cortical actin cytoskeleton; plasma membrane; and site of polarized growth. Predicted to colocalize with actin filament. Orthologous to human HCLS1 (hematopoietic cell-specific Lyn substrate 1). |
ensembl_id | ENSDART00000162585 |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TCONS_00058204 | lncRNA | downstream | 9369 | 22282725 ~ 22291753 (-) | True | XLOC_028768 |
TCONS_00055752 | lncRNA | downstream | 644016 | 21656245 ~ 21657106 (-) | True | XLOC_028764 |
TCONS_00055748 | lncRNA | downstream | 653535 | 21642885 ~ 21647587 (-) | False | XLOC_028762 |
TCONS_00055747 | lncRNA | downstream | 653535 | 21642885 ~ 21647587 (-) | True | XLOC_028762 |
TCONS_00055746 | lncRNA | downstream | 658067 | 21637724 ~ 21643055 (-) | False | XLOC_028762 |
TCONS_00055772 | lncRNA | upstream | 808463 | 23119419 ~ 23123510 (-) | False | XLOC_028777 |
TCONS_00058205 | lncRNA | upstream | 808463 | 23119419 ~ 23125640 (-) | True | XLOC_028777 |
TCONS_00058206 | lncRNA | upstream | 849059 | 23160015 ~ 23210047 (-) | False | XLOC_028778 |
TCONS_00057352 | lncRNA | upstream | 893666 | 23204622 ~ 23210241 (-) | True | XLOC_028778 |
TCONS_00057353 | lncRNA | upstream | 1457522 | 23768478 ~ 23771489 (-) | False | XLOC_028784 |
TCONS_00055754 | mRNA | downstream | 93249 | 21962316 ~ 22207873 (-) | True | XLOC_028766 |
TCONS_00055753 | mRNA | downstream | 449649 | 21751762 ~ 21851473 (-) | True | XLOC_028765 |
TCONS_00055749 | mRNA | downstream | 648310 | 21648010 ~ 21652812 (-) | False | XLOC_028763 |
TCONS_00055750 | mRNA | downstream | 648479 | 21649010 ~ 21652643 (-) | False | XLOC_028763 |
TCONS_00055745 | mRNA | downstream | 716964 | 21488990 ~ 21584158 (-) | True | XLOC_028760 |
TCONS_00055758 | mRNA | upstream | 1900 | 22312856 ~ 22338906 (-) | False | XLOC_028770 |
TCONS_00055759 | mRNA | upstream | 3090 | 22314046 ~ 22335247 (-) | True | XLOC_028770 |
TCONS_00055760 | mRNA | upstream | 42509 | 22353465 ~ 22363709 (-) | True | XLOC_028771 |
TCONS_00055761 | mRNA | upstream | 113495 | 22424451 ~ 22472653 (-) | False | XLOC_028772 |
TCONS_00055762 | mRNA | upstream | 113497 | 22424453 ~ 22472653 (-) | False | XLOC_028772 |
TCONS_00055755 | other | downstream | 63828 | 22236358 ~ 22237294 (-) | True | XLOC_028767 |
TCONS_00055751 | other | downstream | 648490 | 21651671 ~ 21652632 (-) | True | XLOC_028763 |
TCONS_00055737 | other | downstream | 1904952 | 20396049 ~ 20396170 (-) | True | XLOC_028756 |
TCONS_00055724 | other | downstream | 2123254 | 20176143 ~ 20177868 (-) | False | XLOC_028749 |
TCONS_00055714 | other | downstream | 2237888 | 20049324 ~ 20063234 (-) | True | XLOC_028742 |
TCONS_00055773 | other | upstream | 915777 | 23226733 ~ 23226849 (-) | True | XLOC_028779 |
TCONS_00055774 | other | upstream | 1108364 | 23419320 ~ 23419455 (-) | True | XLOC_028780 |
TCONS_00055776 | other | upstream | 1140861 | 23451817 ~ 23451931 (-) | True | XLOC_028782 |
TCONS_00055780 | other | upstream | 1435087 | 23746043 ~ 23754271 (-) | True | XLOC_028783 |
TCONS_00055802 | other | upstream | 3163250 | 25474206 ~ 25478995 (-) | False | XLOC_028796 |