RNA id: TU2444084



Basic Information


Item Value
RNA id TU2444084
length 238
RNA type TUCP
GC content 0.56
exon number 1
gene id G2137086
representative True

Chromosome Information


Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 40415303 ~ 40415540 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


cagtcatggtgtggggtggcatttctttggggggcctcctTGTGCTCGCCAgatgtagcctgactgccattaggtaccgagatgagatcctcagaccccttgtgagaccatatgctggtgcggttggccctgggttcctcctaatgcaagacaatgctagacctcatgtggctggagtgtgtcagcagttcctgcaagagaaaggcattgatgctatggactggcccgcccgttcccc

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU2444082 lncRNA downstream 7459 40407631 ~ 40407844 (-) True G2137084
TU2444079 lncRNA downstream 17784 40397271 ~ 40397519 (-) True G2137081
TU2444078 lncRNA downstream 20379 40394675 ~ 40394924 (-) True G2137080
TU2443246 lncRNA downstream 27694 40387258 ~ 40387609 (-) True G2136448
TU2443227 lncRNA downstream 42993 40372042 ~ 40372310 (-) True G2136431
TU2444085 lncRNA upstream 442 40415982 ~ 40416194 (-) True G2137087
TU2444086 lncRNA upstream 3314 40418854 ~ 40419055 (-) True G2137088
TU2444091 lncRNA upstream 6825 40422365 ~ 40423063 (-) True G2137092
TU2444046 lncRNA upstream 34895 40450435 ~ 40451629 (-) True G2137056
TU2444108 lncRNA upstream 43602 40459142 ~ 40467469 (-) True G2137108
XM_036966347.1 mRNA downstream 97792 40168411 ~ 40317511 (-) False LOC110508253
XM_036966923.1 mRNA downstream 288102 40115401 ~ 40127201 (-) True LOC110509140
XM_036966544.1 mRNA downstream 312155 39973367 ~ 40103148 (-) False LOC110508256
XM_036966545.1 mRNA downstream 312155 39975514 ~ 40103148 (-) False LOC110508256
XM_036966460.1 mRNA downstream 545367 39843311 ~ 39869936 (-) True ndufv2
XM_036966056.1 mRNA upstream 36776 40452316 ~ 40563499 (-) False LOC110508251
XM_036966055.1 mRNA upstream 36776 40452316 ~ 40587932 (-) True LOC110508251
XR_005040272.1 mRNA upstream 181720 40597260 ~ 40599320 (-) True LOC118944871
XR_005040257.1 mRNA upstream 189676 40605216 ~ 40608134 (-) True LOC118944865
XM_036966860.1 mRNA upstream 268851 40684391 ~ 40739695 (-) False zfyve9a
TU2442992 other downstream 293404 40051639 ~ 40121899 (-) True G2136243
TU2442946 other downstream 418257 39990563 ~ 39997046 (-) True LOC110508256
TU2442908 other downstream 469469 39943153 ~ 39945834 (-) True G2136189
TU2442821 other downstream 586124 39803795 ~ 39829179 (-) True LOC110509145
TU2442402 other downstream 1409253 39005461 ~ 39006050 (-) True G2135837
TU2444112 other upstream 56548 40472088 ~ 40475701 (-) False G2137111
TU2444111 other upstream 56715 40472255 ~ 40475701 (-) False G2137111
TU2444115 other upstream 56715 40472255 ~ 40475701 (-) False G2137111
TU2444116 other upstream 56715 40472255 ~ 40475701 (-) False G2137111
TU2444510 other upstream 845260 41260800 ~ 41261271 (-) True G2137419

Expression Profile