Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_021590451.2 |
| length | 3298 |
| RNA type | mRNA |
| GC content | 0.48 |
| exon number | 2 |
| gene id | LOC110509533 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048593.1 |
| NCBI id | CM023247.2 |
| chromosome length | 47748341 |
| location | 4685524 ~ 4690341 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | description |
|---|---|
| K10514 | ZBTB43; zinc finger and BTB domain-containing protein 43 |
4,679,000
4,680,000
4,681,000
4,682,000
4,683,000
4,684,000
4,685,000
4,686,000
4,687,000
4,688,000
4,689,000
4,690,000
4,691,000
4,692,000
NC_048593.1
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU2452186 | lncRNA | downstream | 4929 | 4678732 ~ 4680595 (-) | True | G2144176 |
| TU2452166 | lncRNA | downstream | 20525 | 4664763 ~ 4664999 (-) | True | G2144156 |
| TU2452161 | lncRNA | downstream | 40190 | 4644974 ~ 4645334 (-) | True | G2144151 |
| TU2452146 | lncRNA | downstream | 49197 | 4622687 ~ 4636327 (-) | True | LOC110509302 |
| TU2452106 | lncRNA | downstream | 95839 | 4589374 ~ 4589685 (-) | True | G2144098 |
| TU2452199 | lncRNA | upstream | 8281 | 4698622 ~ 4698927 (-) | True | G2144189 |
| TU2452221 | lncRNA | upstream | 33143 | 4723484 ~ 4723886 (-) | True | G2144211 |
| TU2452222 | lncRNA | upstream | 33807 | 4724148 ~ 4724474 (-) | True | G2144212 |
| TU2452234 | lncRNA | upstream | 41204 | 4731545 ~ 4731766 (-) | True | G2144224 |
| TU2452235 | lncRNA | upstream | 42249 | 4732590 ~ 4732872 (-) | True | G2144225 |
| XM_021590233.2 | mRNA | downstream | 62088 | 4620399 ~ 4623436 (-) | False | LOC110509302 |
| XM_036967220.1 | mRNA | downstream | 254845 | 4208866 ~ 4430679 (-) | False | LOC110509531 |
| XR_005040416.1 | mRNA | downstream | 456330 | 4225423 ~ 4229194 (-) | False | LOC118945302 |
| XM_036967218.1 | mRNA | downstream | 526633 | 4148460 ~ 4158891 (-) | False | LOC110509299 |
| XR_002471442.2 | mRNA | downstream | 623044 | 4044281 ~ 4062480 (-) | True | LOC110509529 |
| XM_021590453.2 | mRNA | upstream | 131852 | 4822193 ~ 4852134 (-) | True | LOC110509534 |
| XM_036968247.1 | mRNA | upstream | 176369 | 4866710 ~ 4871169 (-) | True | LOC110509535 |
| XM_021590456.2 | mRNA | upstream | 378258 | 5068599 ~ 5124878 (-) | True | LOC110509538 |
| XM_021590466.2 | mRNA | upstream | 824550 | 5514891 ~ 5523585 (-) | False | LOC110509542 |
| XM_021590467.2 | mRNA | upstream | 824550 | 5514891 ~ 5523585 (-) | False | LOC110509542 |
| TU2451852 | other | downstream | 254988 | 4321899 ~ 4430536 (-) | False | LOC110509531 |
| TU2451847 | other | downstream | 254988 | 4327423 ~ 4430536 (-) | False | LOC110509531 |
| TU2451849 | other | downstream | 254988 | 4327423 ~ 4430536 (-) | True | LOC110509531 |
| TU2451088 | other | downstream | 1050284 | 3628165 ~ 3635240 (-) | True | G2143134 |
| TU2450893 | other | downstream | 1361428 | 3318943 ~ 3324096 (-) | True | LOC110509525 |
| TU2452980 | other | upstream | 524742 | 5215083 ~ 5226311 (-) | False | G2144911 |
| TU2452976 | other | upstream | 528280 | 5218621 ~ 5226311 (-) | False | G2144911 |
| TU2452979 | other | upstream | 535365 | 5225706 ~ 5226311 (-) | True | G2144911 |
| TU2453443 | other | upstream | 951135 | 5641476 ~ 5672690 (-) | True | G2145316 |
| TU2453473 | other | upstream | 1059345 | 5749686 ~ 5755666 (-) | True | G2145335 |
