RNA id: TCONS_00055843


Basic Information

Item Value
RNA id TCONS_00055843
length 11760
RNA type mRNA
GC content 0.45
exon number 36
gene id XLOC_028821
representative False

Chromosome Information

Item Value
chromosome id NC_007115.7
NCBI id CM002888.2
chromosome length 78093715
location 28190013 ~ 28335184 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

ATGGATCTTGTAATGTGTTGGTTATTATGGGTTCACCTTCTCCTCTGCGCTCCTCTCATGGGATGTTTCGACTTGCACCTCTCGGAGACTTTACATTCAGGAGCTGTTCTTGCCAATTTGTCACTGGGACCGGGCTGGACTTATAAAATAGACTGGACTTTAACTTCCAAGTACATTGGGAACTTTATTAAAGTAGATTGGAGAGATGGAGTGGTGCGTTTAAATGGAGAGGTGGACTGTGCGCGCGCCCCGCACAGCGCGCTGCCTCTTTATTTCAAAATCAAATCATTAACAACTGAAGGACTTGTTAAgacacattttaatgtatttctaCACGGGCAAAACTGCGTGTTCAAATTTAAAAGGAAGAGAGAGACCAAGCCTGATATCAACGTGAACTACATTTATAATTCAGGACTAACTTCCTGCTTGTCTCCAGGtgatttactcattcattttgaGGATTATTTGCCTGTCTTCACAAGAAACTCTGCTGTTTTTGCTTCTTCTTGCACCTCAGACCAACTGAATGTGTTTGTGCGTAACGGGACTTTACTTGTGAAGGACGCGTACTGTTTGGAGACGAACTTGGGGCGCTTTAAAAGCACAATTCGCTGCTCGTTTCTCGATTCTAAAGGTGAGCCCTTCTCTGTGTGCCTTAAACTACGATTCACCTCAGACCAAACTTCATTATCATATGTAACAAATCCAAGAAAACAGAGAATAAAGCGAGCCGCGAATTCAGTGCCTCAGTTTCAGTTATCGAACTACCAGGTTTCAGTGCCCGAAAACGAGCCTGCGGGGACGCGCGTCATCACTCTCAAAGCGACTGTCAGCGACCCCGGTGAAACTGGAAAGATTGAGTATGGAATGGAAGCGCTTTTCGACAGCCGTTCTAACGATTTCTTTCGAATAGACCCTCAAACTGGCAGCATCGAGACTGCCCAGCCCTTAGACAGAGAAGTTAAAGACACTCATGTGTTTAAAGTTACAGCTTCTGTTGCAGGTTTTGCCAAACGTGCAGCCACTTCGTACCTCACAATAACAGTGAGTGACACCAACGACCACGGGCCCGTTTTTGAGCAGAACGAATACAGGGTGAGGATACGAGAAAACGTGGAAGTTGGTTTTGAGGTCATTACGGTCAGGGCAACAGATGGGGACGCTCCATCCAATGCAAACATGATATATAGGATTATGAACGAGGAAGGTGTTAATTCTGGGTTTGAAATTGATTCTTGGAATGGACTGGTCAAGATTAAGGTGCGTCCAGACAGAGAAACTATGGCCCAGTATCAGCTGATTGTAGAGGCCAGTGACCAAGGTAAGGAACCTGGGCCCCGCAGTGCTACTGCGACAGTTCACATCACCGTTGAAGATGAAAATGACAACTATCCTCAATTTAGTGAGAAAAGATATGTGGTCCAGGTGCCTGAAAACGTGGCCGTTAACACTAAAGTAGCCCAGGTAGAAGCCACAGATCGAGATGAAGGCAATAATGCTAGGGTCCATTACAGTATAATCAGTGGCAATGTAAAAGGTCAGTTTTTTATCCACACTCCCACTGGAGCCATTGATGTCATAAACCCTTTGGACTACGAAACAATCAGAGAGTATAATTTACGCATAAAGGCCCAGGATGGGGGCAGGCCTCCTCTCATTAACGGCACAGGAGTCGTTGTGGTTCAAGTAGTGGATGTCAATGACAATGCTCCCATGTTCGTAAGCACTCCTTTCCAAGCAACCGTTTTAGAGAATGTCCCCATTGGATATTCTGTCATTCACATTCAGGCCATTGATTCGGATTCAGGCGAAAATGCCCGGTTAGATTACAGCCTCACAGACACCACTCCAGGCTTCCCTTTCAGTATCAACAACAGCACTGGATGGATAACTGTGAGTGATGAGCTGGACAGGGAAAGCACTGAGTTTTACACCTTTGGAGTGGAGGCCAGAGATAATGGAGTTCCAGTGATGTCATCCTCAGCAAGCGTTAGCATCACTGTCCTAGATGTGAACGACAATATCCCTACGTTCACTGAGAAGATGTATTCCCTGAAAATCAACGAAGATGCTGTTGTCGGGACAAGTGTGTTAACTGTTACAGCTCTGGACCGTGATGTGAACAGTGTAGTCACTTATCAGATCTCCAGTGGCAATACACGCAACAGGTTTGCCATCACTAGCCAAAGTGGAGGTGGACTCATCACACTTGCATTGCCGTTAGATTACAAGCAAGAACGACAATACGTTTTGACCATCACCGCCTCTGACGGCACACGATTTGACACCGCACAAGTGTTCATCAACGTAACCGATGCTAACACTCACAGACCCGTGTTCCAAAACGCCAACTACCATCAAACCTTCAGCGAGGACCAACCCATCGGATCAACTGTTGTGGTCATCAGTGCCACAGATGAGGATACAGGAGAGAATGCACGTATCACCTACATCATGGAGGACAACGTCCCACAGTTTAAGATCGATCCAGACTCGGGCGCCATCACAACACAGATGGAGATCGACTACGAAGATCAAGCCTCCTACACATTAGCCATCATAGCCCGTGACAATGGCATTCCTCAGAAGTCCGACACCACCTATGTGGAAATCATCATTCTGGATGCCAATGACAATTCTCCGCGGTTTGGAAGGGACAAATATCAGGGCACCGTGTTTGAAGATGCCCCTATATACACCAGCGTGCTCCAAATATCAGCTTCTGACAGGGACTCAGGGTCTAATGGACGTGTGAGCTACACCTTTCAAGGTGGCGATGATGGAGAAGGAGACTTCATGATTGAGCAATACTCCGGGATCATCAGAACCCACCGGAAACTGGACAGAGAGAACGTTCCAGTGTATAACCTGAGGGCCTATGCTGTAGACAGAGGAGTTCCTCCTCTCAAAGCTGCGGTGGAGATCCAGGTTTCCGTACTGGACATCAATGACAATGCACCTGTGTTTGAAAAGGATGAACTTTATATCGATGTCAAGGAAAACAGTCCTGTAGATTCAGTGGTTGCCCGAATTACTGCTATGGACCCGGATGAAGGAACCAACGCTCAGATATTATACCAGATTGTTGAAGGAAACATCCCTGAGGTTTTTGACTTGGATATATTCACCGGAGACTTAAAAGCGCTTGTGGATTTGGACTACGAGACCCAAAAGGAGTATGTCATTGTCGTACAGGCTACATCTGCACCTCTGGTGAGCAGAGCAACGGTCCACGTTCGTTTGATCGACGTCAACGATAACGATCCCGTCCTGCAGAATTTCgagattatttttaataactacgTCACCAACAAATCCAACAGCTTTCCATCTGGGATTATAGGAAAGGTGCCTGCCCATGACCCAGACGTGTCAGATAAACTCAAGTATAGTTTCATTGAAGGAAATGAGCTGAGTTTGCTGATTCTAAACCCTGACACAGGAGAGCTAAAACTCAGCAAAGATCTGGATAACAACAGACCTCTGGAGGCCACCATGAAGGTTTCTGTCACAGATGGGATCCACCAAGTCACTGCCTTCTGTACTCTCCGTGTCACCATCATCACTGATGAGATGCTAACAAACAGCATCACAGTCCGTCTGGAGAACATGTCCCAGGAACGCTTCCTATCCCCACTACTCTCCTTGTTCGTCAAAGGTGTAGCAGCTGTCCTCTCAACTAGTCGCGAAGGAGTTTTCATCTTCAATGTCCAGAACGACACGGACGTCAGTGGAAACATCCTCAATGTCACCTTCTCCGCCTTGCTCCCAGGAGGAGTTCCGGATCGCTACTTTCCTTCGGAGGAGCTTCAGGAGCAGATCTACCTGAACCGTACTCTGTTACAGGAAATCTCCAGCCAAAACGTCCTACCATTCGATGACAACATCTGCCTAAGGGAACCTTGCGAGAACTACATGAAATGCGTCTCTGTATTAAAGTTCGACAGCTCTCCACCTTTCATAGCTTCTGATACTGTTCTCTTCAGACCAATACATCCTATTAATGGTCTTCGCTGCCGTTGTCCGGCCGGCTTCACTGGAGACTACTGTGAGACTGAGATTGACCTGTGTTACTCAGGGCCATGCCGCAACAATGGTCGCTGCCGCAGTCGAGAAGGAGGGTACACCTGCGAGTGCCTAGAAGACTTCACAGGTGAGAACTGTGAAGTAGACAGCCGCTCTGGTCGTTGTGTTCCCGGGGTGTGTAAAAACGGAGGCGAGTGTGTCAACCTGCTAGTCGGCGGCTTCACATGCAACTGCCCTTCAGGAGAGTACGAGAAACCCTTCTGTGAGATGACGACCCGCAGCTTTCCCGGACAGTCCTTCATCACTTTCCGAGGCCTAAGACAGAGATTCCACTTCACAGTCTCCTTCATGTTTGCTACGAGAGAGAGAAACGCCCTTCTGCTCTACAATGGTCGCTTCAATGAGAAACATGACTTCATAGCTGTGGAGATCATCGAGGAGCAAATTCAACTCACCTTCTCAGCAGGGGAGTCTAAAACAACCGTTGCACCTTTCGTACCTGGTGGAGTTAGCGATGGCCAGTGGCATTCAGTTCAGCTTCATTACTACAATAAGGACAGCCTGCACCTGCTGGACTCCAGTGGGGTGCTGAGCGTCCACCTCTATACCGCCTGGCTGGAGCTCACTCATAAGGAGCCCAAGATCAGTCATTTGGGGTTGCCTCAAGGTCCGTCAGGTGAAAAGGTGGCAGTGGTTGCTGTAGATGACTGTGACATTGCCATGGCAGTGCGCTTTGGCACTCAGATCGGCAATTACTCATGTGCTGCCCAGGGCACCCAAACCGGCCAGAAGAAGTCTTTGGATCTCACTGGACCACTTTTACTTGGCGGTGTTCCAAATCTTCCGGAGGATTTCCCCATACGGAACCGGGACTTCGTGGGTTGCATGAGGAACCTGACAATTGACAGTAAATCAGTTGACATGGCCAGTTACATTGCCAACAATGGCACTACCGAAGGCTGTCCTGCAAAAAAGAACTTCTGCTACGAGGGTTTGTGTCAGCACGGAGCTCAGTGTGAGAATAAGTGGAACACGCACTTCTGCGAGTGTCCCGAAGGTCGAGGTGGCAAGAACTGTGATCAGGACATGCCTTCACGGCAGCATTTTGACGGTCACGCCATGATGTTATGGAATGATCCTGACATGACCATTGCTGTGCCCTGGTACATTGCCCTGATGTTTCGCACCAGACAAACAAGCCAAACAGCAACCCTGATGCAGGTCAATGCCGGTGACACGTCCCAAATCAACCTTCTGataagagACAAGTATGTGCAGTTTGAAGTGCTTCTCGGAGAGCAGAAGGTGGCCGTGCTGGATTTCACAGATGTCCGAGTGAATGACGGGGAATGGCATCACCTGCTCGTGGAGCTGAGGAGCAGCAAAGATGGGAAGGACACAAAGTACATGGCACAGGTGCTTCTGGACTACGACATGTTCAAGAAGTCAGTAGAGATAGGAAATGAGCTTCCTGGACTCAAACTGAAGAGTTTTTTCATTGGTGGACTTCAGGGCCAGCGTGACATTGTCCAGCAGGGGTTTAAGGGATGCATGCAGGGTCTCAGGATGGGGGAAACGGCCACCAGTACAGCTAACATCAACATGCACCATGCACAAAAGATCCGCGTGGAGGATGGCTGTGACATGAGCGAAAACTGCGATGCCATCAACTGTCCTGAGAACAGCCAATGCACAGACGAACACACCTGCACCTGTGATCCCGGTTTCTTCGGCAGAGACTGTGTTGATGCCTGTCATCTGAACCCGTGCGAGCATTTGTCCACATGTGTTCGTAAACCGAGCTCTTCTCACGGATACACATGCGAGTGCAGTCAGGACTACTATGGACAGTACTGTGAGAACAAAGTTGAAAAACCTTGTCCTCGGGGTTGGTGGGGAAACCCCATGTGTGGTCCTTGCAACTGTGATGTCAGCAAAGGCTTCAATCCTGACTGCAATAAGACTACTGGAGAATGTCGCTGCAAGGACAACTACTATCAGCCAAAAGACAGTGACACCTGTTTCCCCTGTGACTGCTTTCATTTGGGCGCCAACTCGCGAACATGTGACCCAGAGACGGGACAGTGCCCTTGCAAGGCGGGTGTGATTGGGCGACAGTGCAACCGCTGTGACAACCCTTTCTCTGAAGTGACTAGCACCGGCTGTGAGGTTGGATATGAGGGCTGTCCAAAAGCCTTTGATTCTGGAATCTGGTGGCCCAGGACTAATTTTGGTTTCCCTGTGGCAATGAATTGCCCCAAGGGATCTATTGGCACAGCGGTCAGGCACTGCAATGATGAGAAAGGATGGTTGCCCCCTGAACTCTTCAACTGTACCACCATCACATTCTCGCACCTCAAGAAAATGAATGACGATTTGCATCGCAACGAATCCTCAATGGATGGCCAGAAATCAAGAGACATCGCTCGCATGTTGCACAACGCAACCGACCAGACCTCTTCTTTCTATGGCAATGATATCAAGACAACCTACCACCTCCTTTCTTCAATCCTGCGCTATGAGAGCCAGCAGCAGGGCTTTAACCTAGCTGCCATGCGAGACGCCAAATTCAATGAGAACCTAGTGAAGGCTGGCAGCGCAATCCTGGATGCCAGTAATAAAGAGCACTGGGATCAGATACAGAGAACAGAAGGGGGCACGGCAAATCTGCTCAAACACTTTGAGGAATATGCCAACACTCTGGCTCAGAACATGAGGAAGACTTACCTGAAACCCTTCATCATCGTAACAGAGAATATGGTTTTTGCAGTGGATTACTTGGTCACTTATCCAGATGCAACAAAAGTACCCAATTTCCAAACTACTGACCAGGAGTGTCCCAAAGACCTCAAGTCTTCTGTACTTTTCCCAGAATTCAGCTTCAAATCATCAGAGCATAAAGTTTCACCTACAGATGATCCAGAATTTCAGATCAACTCTGATGAAGAGGAGAAGCAGGCTACAAACAAGAGAAAAAGGCATGTTGAGACCATTCCTCCATTTCCTGTGGCTTCAGTCATCATCTATAAAACTCTAGGCCAGTTTCTACCAGAGCACTACGACCCTGACCGCCGCAGCCTCCGggtGCCCAATCGCCCAGTCATTAACACTCCCATCGTGAGCGCAACTGTGTACAGTGAAGGTCAGCCATTGCACATTCCTCTGGAGCGACCAATCACACTGGACTATAACCTTCTGGAGACCGAGGAGAGAACCAAACCTGTGTGCGTCTTCTGGAACCACTCCATCACTGTTGGTGGAGCAGGCGCTTGGTCATCCAAAGGATGTGACATCATCTCCAGAAACCACACTCACATTAGCTGCCAGTGCAATCACATGACCAGCTTTGCCGTCCTTATGGACATCTCCAAAAGAGAGCATGGTGATGTTCTTCCTCTGAAGATTGTCACCTACACCACGGTCTCTGCCTCTCTGCTGGCCCTCTTTATCACCTTCATTCTACTGGCTATATTACACAAACTGCGCTCCAACCTCCACAGCATCCACAAGAACCTGGTGGCTGCCTTGTTCTTCTCCGAGCTGGTCTTCCTTATCGGTATCAACCAAACCGACAACCCGtTTGTGTGTACAGTAATAGCCATCCTCCTGCACTACTTCTACATGTGCACATTTGCCTGGACGTTTGTGGAGGGTTTGCACATTTACCGCATGCTCACCGAAGTCCGAAACATCAACCACGGACACATGCGCTTCTACTACGCCATCGGCTGGGGGATACCTGCTATTATTACagGTCTGGCTGTGGGTTTGGATCCGCAAGGATATGGCAACCCTGACTTCTGCTGGCTGTCCGTCCACGACACCCTCATCTGGAGTTTTGCTGGACCCATCGCTGTGGTGGTACTGGTCAACATTGTTATCTTTGTGATGGCAGCAAAGGCATCATGTGGCCGTAGACAACGCTCCTATGAGAAGTCAGGAGTCACTCCAGCTCTGCGGATGGCCTTCCTGCTCCTCTTGCTTATCAGCGCCACCTGGCTGTTGGGTTTAATGGCTGTTAACAGTGACGTCATGACTTTCCACTACCTGTTTGCCATCTTCAGCTGTCTGCAGggcGTATTCATTTTCTTCTTCCATATTGTGTTCAATAAAGAGGTGAGGAAAAATCTAAAGAACGTTTTCACTGGAAAGAAACAATTACCGGATGAATCCAGCACCACACGCACAACCCTACTGACGCGAACGCTGAACTGTAATAACACATATATGGAGGATGGAGCGCTGTTCCGCTCGGCCATTGGAGAGTCTACGGTGTCTTTAGAGAGCACAGTCAGGTCAGCCAAGAGTCACAGCAGCTACTTTACTTACACTCACAGGGATGAATTGGGTCAGAAACCCAGTGTTTCTGGAAACGCTAAAGCCGGACTCACAGACATAGATGGCTCACTCTTCCGTAATGGCACTAAAGCAGACGACTCAGATTCAGACAGCGAGCTCTCAGTGGATGAACACAGCAGCTCATACGCTTCCTCACACTCATCTGACAGCGAGGATGAAGACATCGACATGCAGCCAAAGTGGAATAATGAGAGACAACCGCTACACAGCACTCCAAAGggcacaaaagaagTGGACACGGTGTCCAATCACGTGAAGCCGTACTGGCCGACTGAAGCCATGACAGCCAGTGATAGTGAAGATCCTGGAGGAGCAGAGAGGCTGAGAGTGGAGACCAAAGTGAACGTGGAGCTCCatcaagaaaataaactcaatcaCATAGGAGAGAGCACTCAGGACAAAGAACAGCCAACACCATCCATACAAGCCAACAGcaaccaccagcctgaacagaGGAAGGGTATTCTGAAGAATAAGATCACATATCCTCCTCCATTGACagacaaaaatatgaaaaacaaacttCGGGAAAAATTATCAGACTACAATCCCCCAACCATTTCTTCCAGAGCACCCTCTATAACCTCTAATGATGGGGGCAATGGACACAATGTCCTGATCAAGCCCCCTCGGCCACCGGTTCCTCCACGAGAACATCTGAACGGCATGGCCATGAATCTGAAATCAGCCACTGTTAATGGAGGAAACCAGTCAGACTCTGACGGCAGTAATGAAACATCAATCTGACCCAGCAGGAAACCCAAGGAACCTCTGCCCTCGTGAAGGAGGAATACCAGTCTGAACTGCGGGAGGAATGTGGGAAGCCAAGTCGAATTACCCAAAGAGCCCTCCGTAGGTGCACCTTGCTCTCCAGCATGTCCCTGGGGTCCAGGCTCCATTGGAGAACAGTATTACTGCAGACGTCTGGCTGTTTAACGAactgataatagaaaataaaggGAATGTATTGAAATACGCAAGACTTTATGGAAGCTGTGCCAAAATGATAAACGTAGGACTACAACCACTCCCAGAATGCCGAGCGACACACTCTAACTGAGTGCCTTTAAAGTGGATTTCGAGAGACGCGTAATAAGACTACTTACTTACGTAATAAGAACTTCACCACTAGTGCTTCTTAAAGAAAATGTGCACACAATTCACACAAGGCTGGAACTGTGTAGAGACTTTTTTTACGATTATGAAACGTAAATCACAGAATGCTGAAATTTTCACCAAGTGCCCTGCTCGGCCCGTCCTCATAGAGGAGATCTGTCTCTTAACTAATATCTTCCTCTTGTAATTAATTGTATATAACTTGTTGTTGTGAATTTGTAATATTATGTGGCATATTTGTatattgaaaaacatttttaataacatttaatgcAGGATTTTTATGTGGTTAGATCACAGATGTTTTGTACTTGATTTGCggattaatttgtattttttctggTGCTGTTTGTCCCAAAACACTAGACTTAAAAGTGCATTAAAAACACAGTTAGATTGTTTGTTCAACACTGAAATTAATACAGTAAAGACATGGCTCTTAGACTCAAGGAAATTGCAATGAATGTTCTGTTTTGCAATCAGATGTCGGTTCATAATTCATATTCCAAAGAAGCCGCGGTGAAAGAGAATTTGCAGGTGTTTTTAAATCAATTCTCATATCAAAAAGACACTGGATTTTTGTTagctgtatttattttgtgttgagaCACTGGACGGAAATTGAagctgtaaaaataaatgctctctcaatttgtatctttattgtatattttctgatttttatttcttttcaaacaagtcagaattattaatattatctaatcaaatattatttacggtcatcatggcaaagaaaaaaataaatcagttattagaaatgagttattaaaactattatgattagaaatgtgttgaaaaaaatcttctcttcgttaaacagaaattggggaaaaaaataaacggggggctaatcattcagggggctaataattctgacttaaactgtatagatggatggttggatggatggatggatggatggatggaaggatggatggatggatggatggatggatggatggatggatggatggatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagattaaacattacattaaacataTCCCAAATCTATtgaaataattcaaaacataaatgatTACTACAATATTGTGACTACACAGTTTTTAATATTGATTCATATAGTAATCACCTTATGTGTGTTCATTTCGTTTAATTTTCAAGTGAATTACAACATTTTAATTCATCAGCAAATGTGTTCCACAAATGTACTCCTTTGAAAGTTTTACATCTCTTGTTTCACATTAGTTCTTGCCCTTAATCTTCTTAACAGATTATGTATATTCCTATTATACCAACTTTCTATTATACTACAATACTATTTTGAAGTAACTTGTAAATGATCTGCACTGTAgacaaaacaactaaacaaaatcaaacaaaacaatattaaagcATACAAATCGATAAACAATTAGTTTGTAGGTATATAATCAGCAGTTTTAACAAGTCTTACTGCTTTTTTGTAGTATGTATACTGATTTTATAATGCTTTTATATGTGTGACCACACACCTCTACACAATAAGCCAGTTTTTTTCCATGTagtgtatgttttgttttgcaattactttgaacatttgtatttttatataattaatatgtgGTTTCCATCATTAATTTATGAACACTTATAAGTAAGCTAAGGTGGCTTGGCCGTCTGTTTTAGAAGCCTCCTCgacgcctacctagggaagtgtttcaggcatgtcccaccgggaggaggcctctgggaagacccaggacatgctggagaaACTatatctctcggctggcctgggaacgacATGGCATCTTTTTTAACACTGCTGGCCCTGTGACCAAGCCCCGAATAAGaggaagaaaatgaaatgaattaatTTGAATCCATTAAAGTGTTACTTTTATTTTCCTTTGCCTTGTATTTTACTTTGCTTTCCTTAAATTCTGTGAACGCCTATTATCATAACCATCAGTTCATTTACCATAGTATTCAGACGATGATCCAAATTGTTTCCTGAACACTATCCTGTAATTTAGCATCATCAACAAACAAAACCATGTTTAAACATTTTGAcagtacatatatacacatggaAACAATATACATGATGTAGGGCCTAAACCTAAACCTTGTGGAACAAACTAAAGAATCCACATATCTTAATACTTAATTAATATAA

Function

GO:

id name namespace
GO:0042074 cell migration involved in gastrulation biological_process
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0007507 heart development biological_process
GO:0098609 cell-cell adhesion biological_process
GO:0021915 neural tube development biological_process
GO:0007155 cell adhesion biological_process
GO:0007156 homophilic cell adhesion via plasma membrane adhesion molecules biological_process
GO:0007165 signal transduction biological_process
GO:0007166 cell surface receptor signaling pathway biological_process
GO:0005886 plasma membrane cellular_component
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0005509 calcium ion binding molecular_function
GO:0004888 transmembrane signaling receptor activity molecular_function
GO:0004930 G protein-coupled receptor activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-030616-78 Predicted to enable G protein-coupled receptor activity and calcium ion binding activity. Acts upstream of or within cell migration involved in gastrulation; heart development; and neural tube development. Predicted to be located in plasma membrane. Predicted to be integral component of membrane. Is expressed in several structures, including axis; germ ring; heart; optic primordium; and pleuroperitoneal region. Human ortholog(s) of this gene implicated in hereditary lymphedema. Orthologous to human CELSR1 (cadherin EGF LAG seven-pass G-type receptor 1).

Ensembl:

ensembl_id ENSDART00000043737

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00058220 lncRNA downstream 1350405 26839078 ~ 26839608 (-) True XLOC_028814
TCONS_00058219 lncRNA downstream 1424203 26752348 ~ 26765810 (-) True XLOC_028813
TCONS_00057358 lncRNA downstream 1767786 26417507 ~ 26422227 (-) True XLOC_028812
TCONS_00057357 lncRNA downstream 1937892 26250874 ~ 26252121 (-) True XLOC_028808
TCONS_00055823 lncRNA downstream 2042463 26127177 ~ 26147550 (-) True XLOC_028807
TCONS_00058221 lncRNA upstream 289685 28624869 ~ 28627715 (-) False XLOC_028826
TCONS_00057359 lncRNA upstream 289685 28624869 ~ 28628533 (-) False XLOC_028826
TCONS_00058222 lncRNA upstream 289685 28624869 ~ 28632583 (-) True XLOC_028826
TCONS_00058223 lncRNA upstream 384045 28719229 ~ 28720774 (-) False XLOC_028827
TCONS_00058224 lncRNA upstream 384045 28719229 ~ 28728040 (-) True XLOC_028827
TCONS_00055842 mRNA downstream 28815 28064292 ~ 28161198 (-) True XLOC_028820
TCONS_00055841 mRNA downstream 31678 28062473 ~ 28158335 (-) False XLOC_028820
TCONS_00055838 mRNA downstream 292698 27626869 ~ 27897315 (-) False XLOC_028819
TCONS_00055846 mRNA upstream 3458 28338642 ~ 28353538 (-) True XLOC_028822
TCONS_00055847 mRNA upstream 36548 28371732 ~ 28373909 (-) False XLOC_028823
TCONS_00055848 mRNA upstream 36982 28372166 ~ 28375127 (-) True XLOC_028823
TCONS_00055852 mRNA upstream 616374 28951558 ~ 28958601 (-) True XLOC_028830
TCONS_00055853 mRNA upstream 697459 29032643 ~ 29050583 (-) False XLOC_028831
TCONS_00055832 other downstream 1048710 27141179 ~ 27141303 (-) True XLOC_028817
TCONS_00055829 other downstream 1090728 27088371 ~ 27099285 (-) True XLOC_028815
TCONS_00055827 other downstream 1782750 26407146 ~ 26407263 (-) True XLOC_028811
TCONS_00055813 other downstream 2349111 25840786 ~ 25840902 (-) True XLOC_028802
TCONS_00055802 other downstream 2711018 25474206 ~ 25478995 (-) False XLOC_028796
TCONS_00055849 other upstream 97147 28432331 ~ 28432445 (-) True XLOC_028824
TCONS_00055850 other upstream 206837 28542021 ~ 28542135 (-) True XLOC_028825
TCONS_00055851 other upstream 494710 28829894 ~ 28855677 (-) False XLOC_028829
TCONS_00055888 other upstream 2620157 30955341 ~ 30955504 (-) True XLOC_028861
TCONS_00055889 other upstream 2639732 30974916 ~ 30975079 (-) True XLOC_028862

Expression Profile

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