Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU2460645 |
| length | 1313 |
| lncRNA type | sense_over |
| GC content | 0.42 |
| exon number | 2 |
| gene id | LOC110512753 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048593.1 |
| NCBI id | CM023247.2 |
| chromosome length | 47748341 |
| location | 11351194 ~ 11448019 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | name | namespace |
|---|---|---|
| GO:0038032 | termination of G protein-coupled receptor signaling pathway | biological_process |
| GO:0007224 | smoothened signaling pathway | biological_process |
| GO:0043009 | chordate embryonic development | biological_process |
| GO:0055001 | muscle cell development | biological_process |
| GO:0006468 | protein phosphorylation | biological_process |
| GO:0005524 | ATP binding | molecular_function |
| GO:0004703 | G protein-coupled receptor kinase activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU2460661 | lncRNA | downstream | 26397 | 11317599 ~ 11326837 (-) | True | LOC110509360 |
| TU2460626 | lncRNA | downstream | 100771 | 11245236 ~ 11252463 (-) | True | G2151894 |
| TU2460571 | lncRNA | downstream | 112687 | 11240212 ~ 11240547 (-) | True | G2151846 |
| TU2460570 | lncRNA | downstream | 113126 | 11239773 ~ 11240108 (-) | True | G2151845 |
| TU2460512 | lncRNA | downstream | 219538 | 11132594 ~ 11133696 (-) | True | G2151799 |
| TU2460682 | lncRNA | upstream | 2190 | 11356760 ~ 11357715 (-) | True | G2151944 |
| TU2460691 | lncRNA | upstream | 71317 | 11425887 ~ 11427513 (-) | True | G2151952 |
| TU2460692 | lncRNA | upstream | 71605 | 11426175 ~ 11428409 (-) | True | G2151953 |
| TU2460693 | lncRNA | upstream | 71964 | 11426534 ~ 11427394 (-) | True | G2151954 |
| TU2460694 | lncRNA | upstream | 77251 | 11431821 ~ 11432908 (-) | True | G2151955 |
| LOC110509360 | mRNA | downstream | 5593 | 11315643 ~ 11347641 (-) | False | LOC110509360 |
| XM_036968172.1 | mRNA | downstream | 19705 | 11329949 ~ 11333529 (-) | True | LOC110509319 |
| XM_036967953.1 | mRNA | downstream | 52410 | 11250269 ~ 11300824 (-) | False | LOC110509318 |
| XM_036967954.1 | mRNA | downstream | 52410 | 11250269 ~ 11300824 (-) | True | LOC110509318 |
| NM_001124306.1 | mRNA | downstream | 109229 | 11241994 ~ 11244005 (-) | False | LOC100135966 |
| XM_036967339.1 | mRNA | upstream | 94404 | 11448974 ~ 11452011 (-) | True | LOC110509320 |
| XM_021590620.2 | mRNA | upstream | 110274 | 11464844 ~ 11468057 (-) | True | LOC110509622 |
| XM_036968069.1 | mRNA | upstream | 148588 | 11503158 ~ 11509942 (-) | True | LOC118945324 |
| XM_021590622.2 | mRNA | upstream | 168883 | 11523453 ~ 11525214 (-) | False | LOC110509625 |
| XM_021590624.2 | mRNA | upstream | 289463 | 11644033 ~ 11655110 (-) | True | LOC110509627 |
| TU2460556 | other | downstream | 109174 | 11241994 ~ 11244060 (-) | True | LOC100135966 |
| TU2460472 | other | downstream | 359355 | 10993166 ~ 10993879 (-) | True | G2151771 |
| TU2460429 | other | downstream | 383933 | 10951249 ~ 10969301 (-) | True | ttll11 |
| TU2459830 | other | downstream | 553916 | 10718021 ~ 10799318 (-) | True | G2151189 |
| TU2458082 | other | downstream | 1915697 | 9365212 ~ 9437537 (-) | True | ttc33 |
| TU2460707 | other | upstream | 102048 | 11456618 ~ 11525152 (-) | True | LOC110509625 |
| TU2460859 | other | upstream | 367502 | 11722072 ~ 11722479 (-) | True | G2152107 |
| TU2461170 | other | upstream | 586892 | 11941462 ~ 11944153 (-) | False | atg10 |
| TU2461172 | other | upstream | 586892 | 11941462 ~ 11944153 (-) | True | atg10 |
| TU2462005 | other | upstream | 1294606 | 12649176 ~ 12649495 (-) | True | G2153174 |
