Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_021590740.2 |
| length | 1409 |
| RNA type | mRNA |
| GC content | 0.48 |
| exon number | 11 |
| gene id | LOC110509699 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048593.1 |
| NCBI id | CM023247.2 |
| chromosome length | 47748341 |
| location | 14956340 ~ 14970212 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | description |
|---|---|
| K24925 | SGTB; small glutamine-rich tetratricopeptide repeat-containing protein beta |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU2464521 | lncRNA | upstream | 138424 | 14814444 ~ 14817916 (+) | True | G2155517 |
| TU2464457 | lncRNA | upstream | 291306 | 14664802 ~ 14665034 (+) | True | G2155455 |
| TU2464456 | lncRNA | upstream | 293245 | 14662668 ~ 14663095 (+) | True | G2155454 |
| TU2464404 | lncRNA | upstream | 356519 | 14599590 ~ 14599821 (+) | True | G2155402 |
| TU2464403 | lncRNA | upstream | 356957 | 14599164 ~ 14599383 (+) | True | G2155401 |
| TU2464747 | lncRNA | downstream | 135770 | 15105982 ~ 15108773 (+) | False | G2155717 |
| TU2464748 | lncRNA | downstream | 135770 | 15105982 ~ 15108773 (+) | False | G2155717 |
| TU2464749 | lncRNA | downstream | 135770 | 15105982 ~ 15108773 (+) | False | G2155717 |
| TU2464750 | lncRNA | downstream | 135770 | 15105982 ~ 15108773 (+) | False | G2155717 |
| TU2464751 | lncRNA | downstream | 135770 | 15105982 ~ 15108773 (+) | False | G2155717 |
| XR_002471471.2 | mRNA | upstream | 76417 | 14875717 ~ 14879923 (+) | False | LOC110509698 |
| XR_005040399.1 | mRNA | upstream | 76417 | 14875717 ~ 14879923 (+) | True | LOC110509698 |
| XM_021590738.2 | mRNA | upstream | 150076 | 14785987 ~ 14806264 (+) | True | LOC110509696 |
| XM_036967370.1 | mRNA | upstream | 559532 | 14289212 ~ 14396808 (+) | False | LOC110509691 |
| trnaa-ugc-224 | mRNA | downstream | 59816 | 15030028 ~ 15030099 (+) | True | trnaa-ugc-224 |
| XR_002471473.2 | mRNA | downstream | 179076 | 15149288 ~ 15151748 (+) | True | LOC110509704 |
| LOC110509331 | mRNA | downstream | 868103 | 15838315 ~ 15844398 (+) | True | LOC110509331 |
| XM_021590751.2 | mRNA | downstream | 953639 | 15923851 ~ 15929722 (+) | True | LOC110509705 |
| XM_021590764.2 | mRNA | downstream | 1061545 | 16031757 ~ 16061375 (+) | False | ehmt1b |
| TU2463446 | other | upstream | 1020521 | 13933248 ~ 13935819 (+) | True | G2154512 |
| TU2463371 | other | upstream | 1142370 | 13806013 ~ 13813970 (+) | True | G2154438 |
| TU2463316 | other | upstream | 1180206 | 13773747 ~ 13776134 (+) | True | G2154391 |
| TU2463318 | other | upstream | 1182252 | 13772708 ~ 13774088 (+) | False | G2154391 |
| TU2463200 | other | upstream | 1287170 | 13668289 ~ 13669170 (+) | True | G2154294 |
| TU2464720 | other | downstream | 48415 | 15018627 ~ 15093949 (+) | True | G2155696 |
| TU2466780 | other | downstream | 1380505 | 16350717 ~ 16353665 (+) | True | G2157602 |
| TU2467775 | other | downstream | 2219132 | 17189344 ~ 17191098 (+) | False | G2158499 |
| TU2467776 | other | downstream | 2219291 | 17189503 ~ 17191128 (+) | True | G2158499 |
| TU2470138 | other | downstream | 4090331 | 19060543 ~ 19065772 (+) | False | LOC110509751 |
