RNA id: XM_021590867.2


Basic Information

Item Value
RNA id XM_021590867.2
length 4261
RNA type mRNA
GC content 0.46
exon number 22
gene id LOC100136307
representative True

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 19738585 ~ 19785892 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

TGCTAAATTGTCTTTCAGATTATTGTCCAAGCCAGTTTATATTTAACTGATTATCTATTTTCCTGGTCCTAGAGACCCACATGGTGTGCAGTTTTTTGTTCCAGCCCCCAGTACTCACACCTGATTCAATGGTAGTTGAATCCGTTCTGTTAGTGCTGTGGCTGAACAAAAGCTTGCACACCATGTGGGTCTCCAGGACCAAGATTGAAGAACTGTGACAGCAGGCAGGGGGCGCCTCATCCCTGTCTTTCTCGGACCTGTGATATCACGTGTGGGGGGGTGTACTGAAGGTTGCAGTGATTATAGTCATATGGATGGATGTTATCACACTTTGAGGGGGGAGTTGAGGAACATCAGTCCGAAAACTGCACCGAAGTGAACAACTCCCGGAATCACGCTGCTAGAGAACAATTAGTGCACCGAAGTGAACAACTCATGGAATCACGCTGCTGGAGAACAATTAGAACAAAATTATAGAGGATAAATTACACATGGATTACCTAAGCATTTATTATTTTGACTGAAATTGCATTTCAATAGAGTACCATATGGTTCGGTTTCAGGACAGTAAGGCGTTTTACCACTTCCCAGGTGAACTCACGAGGTCCGTTTTCTTGGATTTATTTAACGTCAAATTTGAGCAATGGGATATAAAACGGAACTTGGATATTGTTTATTTGTGTTATTCACATATTCTCTCATATCCAGGTGTCGAATGAATATGGAAAATAATATCACAGTTGCGGTGATGCTTCCCGATAATTACCACAAGTATCCATGGGCTTTGCCTCGGGTTTTCCCAGCAATTCTTATGGCGAACGAGAATCTCCAGAAGAAGCACGGACTTCTCAAGGGCCACTCTATTCAACTCTTGAATTTCAGCACGGAGGATTCAACCGGTGTCTGCGCAGAAAATAAGGCACAGATTATCGCCGTGGACACCAAACTTTATAATAAACCAGATGCTTTCTTTGGACCAGGTTGCGTGTATTCAGTGGCCTCAGTTGGAAGATTTGCATCCCATTGGAAACTCCCATTGATAACTGCGGGAGGAACTGCATATGGGTTTGATAAAGGGGACGAGTACAATACGATTGTTCGCACCGGACCCTCGACCACCAAACTGGGAGACTTTGCAAACATTATTCACGCGCACTATAATTGGACCTCTCGTGCCATTCTGATTTTCCACGATTTGAAAAAAGATGACCGACCTCACTACTTCCTCTCTGAAGGAATTTACCTAAATTTGAAGGATGAAAATGTCACAGTTGGTGCCTTTCCATATGAAGACTCACCAAGCTATTATAAAGAAATCATTACTTTCATGAAAGACCACGGAAGAATTGTGTATATCTGTGGGCCTCCGGACACGTTTCTGAGTATCATGAAGCTTTTCCAGAGTGAGATCCCAGACCCTGAGAACTACGCCATCTTCTATCTGGATGTGTTTGCGGAAAGCCTAACGGAGCGCAAACCCTGGCTGAACAACGACAGCCTCTGGATTGATCCCATCAAGGTCTTCAAGtctgtgttggtaataaCATACAGGGAGCCTGATAATCCAGAGTATAAAGAGTTCCAAGATGAGCTCCACATTAGAGCCCAGAAGGACTTTGATGTGAACATAGAACCCTCTCTGATGGATTTCATCGCTGGCTGCTTCTATGATGGCTTTGTGATGTATGCTAAGGCCTTGGAGGAGACGCTGGCGGAGGGGGGCTCCCAGAGCGATGGAATCAACATCACACAGAGGATGCAAAACCTGCGATTTTGGGGGGTTACAGGACTTGTGACCACAGACAAAAACAATGCTAGGAACACTGATTTCAACCTCTGGGCAATGACAAACCAGGAATCTGGAGAGTATGGGCTTGTGGCCCATTACAATGGAACTAACAAAGAGATCATCTGGTCCTCAACGGAGAGGATTCATTGGCCCAAAGGGAGCCCACCTCTGGATAACCCACCGTGCGTCTTCTCTTCTGATGAGCCTATCTGCATTGATGCTCACCTTCCAGTGCTGGGGATTGTAGCTGTTGGGTCTGGCTTAGCCCTCATCATTTTTGGAATCTCCAGCTTCCTCATTTACAGGAAGCTGAAGCTAGAGAAGGAGTTGGCTGGAATGCTGTGGAGGATAAAGTGGGAGGACCTGCAGTTTGAGAGCCCCAACAAATACCCCAAAAAAGCAGGCAGCCGTCTGACCCTCTCACAGAGAGGCTCCAGCTACGGCTCCTTGATAACTGCCCATGGAAAATATCAGCTATTTGCTAAAACAGGCTATTTTAAGGGCAACCTGGTGGCCATCAAACATGTGAACAAGAAGAGGATCGAGCTGACCAGACAAGTGCTGTTCGAGCTCAAACATATGAGAGATGTGCAGTTCAATCATTTAACCAGATTCATCGGTGCCTGCATTGACCCTCCCAACAACTGCATAGTGACTGAATATTGTCCCAGAGGTAGTCTTCAGGACATTTTGGAGAATGAGAGCATCAATCTGGACTGGATGTTCCGCTATTCACTCATCAACGACATAGTCAAGGGAATGAACTATCTTCACAACAGCTACATTGGCTCCCATGGAAATCTGAAGTCATCTAATTGTGTGGTGGACAGTCGATTTGTGTTGAAAATTACGGATTACGGCCTGGCCAGTTTCCGTTCATCATGTGAAAATGACGACTCGCACGCACTCTATGCAAAGAAGCTGTGGACGGCCCCTGAGTTGTTGATCTACGACAGACACCCTCCACAGGGCACCCAGAAAGGAGACGTGTACAGCTTTGGCATCATACTCCAGGAGATAGCCTTGAGGAATGGACCCTTCTATGTGGACGGCATGGATCTGAGCCCCAAAGAGATAGTGCAGAAGGTGCGTAACGGCCAGAAGCCTTACTTCCGGCCCACCACAGACAACAGCTGCCACTGTGAGGAGCTGACCATCCTGATGGACAGCTGCTGGGCCGAGGACCCCGTCGAGCGGCCTGACTTTAGCCATATCAAGATCTACATCACCAAACTCAACAAGGAGGGAAGTACAAGCATTCTGAACAACCTGCTGTCCAGGATGGAGCAGTACGCCAACAACCTGGAGAACCTGGTAGAGGAACGAACGCAAGCCTAcctggaggagaagagaaaagCCGAAAATCTACTTTACCAGATCTTGCCACACTCAGTAGCAGAGCAGCTAAAGCGAGGGGAGACGGTCCAAGCGGAGGCATTTGACAGTGTGACAATCTACTTCAGTGACATTGTGGGCTTCACATCAATGTCAGCTGAGAGTACACCACTGCAGGTTGTGACGGTGCTGAATGATCTTTACACCTGCTTTGATGCCATCATCGATAATTTTGATGTGTACAAGGTGGAGACCATTGGTGATGCGTACATGGTGGTGTCAGGGCTTCCGGTAAGGAATGGTAAACTCCACGCAAGAGAGATCGCTGGGATGTCATTAGCCTTACTAGAACAGGTGAAAACATTCAAGATTCGACACAGACCCCAAGACCAGCTACGGCTAAGGATAGGAATCCACACAGGACCTGTCTGTGCTGGGGTGGTGGGTCTGAAAATGCCCAGATATTGTTTATTTGGAGATACTGTCAACACAGCGTCTCGGATGGAATCGAATGGAGAGGCCTTGAGGATCCACCTCTCCTCAGCCACCAAAGAAGTGCTGGATGAGTTTGGCTATTTTGATCTCCAGTTAAGAGGAGACGTGGAAATGAAGGGCAAAGGCAAAATGAGAACCTATTGGCTTCAGGGGGAGAAGACTGACGTGTACGTTATTTGAGAGGCGCTGCTGTACTCACATTGGAGCCAACCACAGAGGAGGCTACACAGTGGCACAGCCAGCCACTGCTTTATTTGTTTTAGAATAAGTCCTAAAGGTGATACCCTCCTAAAGTACGAAAAGAAGGGATATTTAATGGTATGTTTAATACCTGTGTACGGTAACTGCAAAAAGTTGTAAAGGTGTTTTGTATGAAGAATCTTTCTGTCCTGAGAGTGAGTACTTTTCGATGATGATGAATTCATATTTTTTTGTGCTTTATATCAAGATTTGTATAATGTGTTTGGAAGTCAATGATGTATTAATAGTTCATACAGCGTTCATAACAGATGGGCACAGTGTAATGATCAATGTCAATGCAGAGGTTAGAGTTCCACAGTGATGTCATACAGTACAAGatgatatatgtatatatgtacatCCAAGATATTTTGTTCAATAAACGGAGTAAAATACAACAAA

Function

GO: NA

KEGG:

id description
K12324 ANPRB, NPR2; atrial natriuretic peptide receptor B

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU2471499 lncRNA downstream 31951 19706401 ~ 19706634 (-) True G2161886
TU2471490 lncRNA downstream 43032 19695332 ~ 19695553 (-) True G2161877
TU2471486 lncRNA downstream 50547 19687745 ~ 19688038 (-) True G2161873
TU2471483 lncRNA downstream 54529 19683826 ~ 19684056 (-) True G2161870
TU2471475 lncRNA downstream 62092 19674997 ~ 19676493 (-) True G2161862
TU2471562 lncRNA upstream 61084 19846976 ~ 19847183 (-) True G2161945
TU2471517 lncRNA upstream 93941 19879833 ~ 19880306 (-) False G2161904
TU2471519 lncRNA upstream 94113 19880005 ~ 19881605 (-) True G2161904
TU2471523 lncRNA upstream 96176 19882068 ~ 19882595 (-) True G2161908
TU2471586 lncRNA upstream 154248 19940140 ~ 19940386 (-) True G2161969
XM_021590863.2 mRNA downstream 21893 19716063 ~ 19716692 (-) True pmchl
XM_036967847.1 mRNA downstream 127360 19599862 ~ 19611225 (-) True LOC110509765
XM_036967846.1 mRNA downstream 128905 19599862 ~ 19609680 (-) False LOC110509765
XM_036967849.1 mRNA downstream 128905 19599862 ~ 19609680 (-) False LOC110509765
LOC110509339 mRNA downstream 219685 19514805 ~ 19518900 (-) True LOC110509339
XM_036968340.1 mRNA upstream 629 19786521 ~ 19792894 (-) False LOC110509772
XM_036968339.1 mRNA upstream 633 19786525 ~ 19792894 (-) False LOC110509772
XM_036968338.1 mRNA upstream 977 19786869 ~ 19792894 (-) True LOC110509772
XM_021590869.2 mRNA upstream 21368 19807260 ~ 19835269 (-) True LOC110509773
XR_002471482.2 mRNA upstream 51343 19837235 ~ 19840679 (-) False LOC110509775
TU2470823 other downstream 461579 19276268 ~ 19277006 (-) True LOC110509757
TU2467320 other downstream 3091988 16643681 ~ 16646597 (-) True G2158111
TU2467297 other downstream 3130579 16607625 ~ 16608006 (-) True G2158088
TU2466925 other downstream 3315164 16421677 ~ 16423421 (-) True G2157743
TU2466897 other downstream 3352540 16381190 ~ 16386045 (-) True G2157715
TU2471632 other upstream 198653 19984545 ~ 19984779 (-) True G2162005
TU2471779 other upstream 297253 20083145 ~ 20083618 (-) True G2162127
TU2471773 other upstream 302338 20088230 ~ 20093660 (-) True LOC110509788
TU2472094 other upstream 523297 20309189 ~ 20309802 (-) False G2162405
TU2472087 other upstream 523353 20309245 ~ 20309802 (-) True G2162405

Expression Profile