Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00058248 |
| length | 1270 |
| lncRNA type | intronic |
| GC content | 0.34 |
| exon number | 4 |
| gene id | XLOC_028892 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_007115.7 |
| NCBI id | CM002888.2 |
| chromosome length | 78093715 |
| location | 31957130 ~ 31960108 (-) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0007268 | chemical synaptic transmission | biological_process |
| GO:0098916 | anterograde trans-synaptic signaling | biological_process |
| GO:1903361 | protein localization to basolateral plasma membrane | biological_process |
| GO:0097025 | MPP7-DLG1-LIN7 complex | cellular_component |
| GO:0098793 | presynapse | cellular_component |
| GO:0097016 | L27 domain binding | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00055930 | lncRNA | downstream | 268551 | 31686916 ~ 31688579 (-) | False | XLOC_028888 |
| TCONS_00058245 | lncRNA | downstream | 309674 | 31634603 ~ 31647456 (-) | False | XLOC_028888 |
| TCONS_00055919 | lncRNA | downstream | 309674 | 31634603 ~ 31647456 (-) | False | XLOC_028888 |
| TCONS_00057369 | lncRNA | downstream | 329030 | 31626266 ~ 31628100 (-) | True | XLOC_028890 |
| TCONS_00055918 | lncRNA | downstream | 399633 | 31555894 ~ 31557497 (-) | True | XLOC_028889 |
| TCONS_00058249 | lncRNA | upstream | 26194 | 31986302 ~ 31992146 (-) | False | XLOC_028891 |
| TCONS_00055934 | lncRNA | upstream | 26194 | 31986302 ~ 31993242 (-) | False | XLOC_028891 |
| TCONS_00055935 | lncRNA | upstream | 31676 | 31991784 ~ 31993242 (-) | True | XLOC_028891 |
| TCONS_00055936 | lncRNA | upstream | 81986 | 32042094 ~ 32042540 (-) | True | XLOC_028893 |
| TCONS_00055951 | lncRNA | upstream | 470474 | 32430582 ~ 32432589 (-) | False | XLOC_028899 |
| TCONS_00055931 | mRNA | downstream | 162024 | 31716730 ~ 31795106 (-) | True | XLOC_028888 |
| TCONS_00055929 | mRNA | downstream | 257288 | 31686375 ~ 31699842 (-) | False | XLOC_028888 |
| TCONS_00055928 | mRNA | downstream | 257983 | 31661002 ~ 31699147 (-) | False | XLOC_028888 |
| TCONS_00055937 | mRNA | upstream | 136703 | 32096811 ~ 32097405 (-) | True | XLOC_028894 |
| TCONS_00055938 | mRNA | upstream | 214029 | 32174137 ~ 32179699 (-) | False | XLOC_028895 |
| TCONS_00055939 | mRNA | upstream | 215224 | 32175332 ~ 32180155 (-) | False | XLOC_028895 |
| TCONS_00055940 | mRNA | upstream | 215987 | 32176095 ~ 32179699 (-) | True | XLOC_028895 |
| TCONS_00055941 | mRNA | upstream | 231270 | 32191378 ~ 32192868 (-) | True | XLOC_028896 |
| TCONS_00055912 | other | downstream | 729503 | 31227559 ~ 31227627 (-) | True | XLOC_028884 |
| TCONS_00055911 | other | downstream | 732480 | 31224544 ~ 31224650 (-) | True | XLOC_028883 |
| TCONS_00055910 | other | downstream | 733536 | 31223488 ~ 31223594 (-) | True | XLOC_028882 |
| TCONS_00055909 | other | downstream | 735648 | 31221376 ~ 31221482 (-) | True | XLOC_028881 |
| TCONS_00055908 | other | downstream | 737765 | 31219259 ~ 31219365 (-) | True | XLOC_028880 |
| TCONS_00055942 | other | upstream | 296164 | 32256272 ~ 32256435 (-) | True | XLOC_028897 |
| TCONS_00055943 | other | upstream | 297474 | 32257582 ~ 32257730 (-) | True | XLOC_028898 |
| TCONS_00055966 | other | upstream | 1430114 | 33390222 ~ 33390384 (-) | True | XLOC_028909 |
| TCONS_00055967 | other | upstream | 1431667 | 33391775 ~ 33391921 (-) | True | XLOC_028910 |
| TCONS_00055975 | other | upstream | 2006809 | 33966917 ~ 33967068 (-) | True | XLOC_028918 |
