RNA id: TCONS_00056013


Basic Information

Item Value
RNA id TCONS_00056013
length 470
RNA type processed_transcript
GC content 0.35
exon number 2
gene id XLOC_028946
representative False

Chromosome Information

Item Value
chromosome id NC_007115.7
NCBI id CM002888.2
chromosome length 78093715
location 36789137 ~ 36791395 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

ACAACATTGCTCTCCAAATAGAGACTTGGTTGTAATAGGTTGAATGAGTGGGCCTTACAAACCATTCACCTTTACTTCCAGAGAATTGTATTTTCTCTTgtcttttgctcttttttttcatAAGTTTTCTTTATGCAATAGTGAGAGTGTGAGTAGGCTACTCCATATTCTCTCCTCTCTCTCAGGATTCTGTACAACACATGTGGAATTACAGCCTGattaCCAAGGCTTTTATGGTCAGCAGACATGGACCTCACTGCTGAGAATTAACCTGGCATCTTAATTCTTCATTACCTATGTTGTCTctatgttgtttgattaatgttcAGATTTTGTTCATTTGGTTGCACTTGTATGTACTGgaagttgtttattttctttagtgttgttattacttgatattactattatatatacaGTCTTCTACTGTGCCGTTATTTCACATTCTTAATAAAAAGTTGCAGAAATGA

Function

GO: NA

KEGG: NA

ZFIN:

id description
ZDB-GENE-041014-75 No description available

Ensembl:

ensembl_id ENSDART00000160035

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00057380 lncRNA downstream 18480 36764140 ~ 36770657 (-) False XLOC_028945
TCONS_00058265 lncRNA downstream 203498 36585319 ~ 36585639 (-) True XLOC_028944
TCONS_00057379 lncRNA downstream 205769 36581203 ~ 36583368 (-) True XLOC_028943
TCONS_00058264 lncRNA downstream 292843 36494958 ~ 36496294 (-) True XLOC_028941
TCONS_00058263 lncRNA downstream 977899 35809453 ~ 35811238 (-) True XLOC_028935
TCONS_00058266 lncRNA upstream 477503 37267210 ~ 37271230 (-) False XLOC_028950
TCONS_00057382 lncRNA upstream 482311 37272018 ~ 37273043 (-) False XLOC_028951
TCONS_00057381 lncRNA upstream 482311 37272018 ~ 37273043 (-) True XLOC_028951
TCONS_00057383 lncRNA upstream 538820 37328527 ~ 37333793 (-) True XLOC_028952
TCONS_00057384 lncRNA upstream 589430 37379137 ~ 37380416 (-) False XLOC_028953
TCONS_00056011 mRNA downstream 266580 36506439 ~ 36522557 (-) True XLOC_028942
TCONS_00056010 mRNA downstream 304194 36474013 ~ 36484943 (-) True XLOC_028940
TCONS_00056009 mRNA downstream 312248 36473781 ~ 36476889 (-) False XLOC_028940
TCONS_00056004 mRNA downstream 644637 36132112 ~ 36144500 (-) False XLOC_028939
TCONS_00056008 mRNA downstream 645210 36133400 ~ 36143927 (-) False XLOC_028939
TCONS_00056016 mRNA upstream 2025 36791732 ~ 36792144 (-) True XLOC_028947
TCONS_00056017 mRNA upstream 2567 36792274 ~ 36793658 (-) True XLOC_028948
TCONS_00056018 mRNA upstream 440880 37230587 ~ 37236494 (-) False XLOC_028949
TCONS_00056019 mRNA upstream 441135 37230842 ~ 37235635 (-) True XLOC_028949
TCONS_00056023 mRNA upstream 686660 37476367 ~ 37479399 (-) False XLOC_028954
TCONS_00055992 other downstream 1053968 35735006 ~ 35735169 (-) True XLOC_028934
TCONS_00055991 other downstream 1555724 35233297 ~ 35233413 (-) True XLOC_028931
TCONS_00055986 other downstream 2200050 34553067 ~ 34589087 (-) False XLOC_028925
TCONS_00055976 other downstream 2820785 33968210 ~ 33968352 (-) True XLOC_028919
TCONS_00055975 other downstream 2822069 33966917 ~ 33967068 (-) True XLOC_028918
TCONS_00056015 other upstream 472 36790179 ~ 36790965 (-) True XLOC_028946
TCONS_00056020 other upstream 477503 37267210 ~ 37271230 (-) False XLOC_028950
TCONS_00056021 other upstream 478860 37268567 ~ 37270590 (-) False XLOC_028950
TCONS_00056022 other upstream 478955 37268662 ~ 37271042 (-) True XLOC_028950
TCONS_00056030 other upstream 940412 37730119 ~ 37730282 (-) True XLOC_028959

Expression Profile

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