RNA id: TU2447427



Basic Information


Item Value
RNA id TU2447427
length 277
RNA type TUCP
GC content 0.58
exon number 1
gene id G2139807
representative True

Chromosome Information


Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 378211 ~ 378487 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


GTGAAACGGTGCGAATGAAGCCACTACCAGGGGACCGGACGGGCCTCTGGAGACTCGGATCCTGTGTACAGAAAGTGGCACCACGCTCCTACTTGGTCGAAGTGAATGGATCACTGTACcgtcgtaacagggttgaccttcggaTTGCTGAGCCAGCACCTACTCAGAACCCTGATGGCCAAAGGGGTCGCATGACAAAAGACGGAACCCCAGCAAGTCACATGGGGCCTGAGGCACTGGGCGAAGAGCCAGGGGATCACAGGTCAGCCGCTCCCTC

Function


GO: NA

KEGG: NA

JBrowse2


Loading

Neighbor


RNA id RNA type direction distance location representative gene id
TU2447403 lncRNA downstream 47487 330168 ~ 330724 (-) True G2139784
TU2447377 lncRNA downstream 84138 283933 ~ 294073 (-) False G2139765
TU2447376 lncRNA downstream 87325 288919 ~ 290886 (-) True G2139765
TU2447292 lncRNA downstream 236121 141278 ~ 142090 (-) True G2139683
TU2447221 lncRNA downstream 327178 39672 ~ 51033 (-) False G2139618
TU2447430 lncRNA upstream 5131 383618 ~ 383838 (-) True G2139810
TU2447471 lncRNA upstream 40568 419055 ~ 463228 (-) True G2139832
TU2447461 lncRNA upstream 57545 436032 ~ 437371 (-) True LOC110509492
TU2447526 lncRNA upstream 97632 476119 ~ 476800 (-) True G2139878
TU2447474 lncRNA upstream 104143 482630 ~ 485339 (-) True LOC110509494
XM_036967741.1 mRNA downstream 900 309563 ~ 377311 (-) True LOC110509489
XM_036967739.1 mRNA downstream 8363 309563 ~ 369848 (-) False LOC110509489
XM_021590383.2 mRNA downstream 8364 309563 ~ 369847 (-) False LOC110509489
XM_036967737.1 mRNA downstream 8364 309563 ~ 369847 (-) False LOC110509489
XM_036967738.1 mRNA downstream 8364 309563 ~ 369847 (-) False LOC110509489
XM_036967663.1 mRNA upstream 20024 398511 ~ 413361 (-) False LOC110509490
XM_036967662.1 mRNA upstream 20024 398511 ~ 414046 (-) False LOC110509490
XM_036967658.1 mRNA upstream 20024 398511 ~ 425355 (-) False LOC110509490
XM_036967660.1 mRNA upstream 20024 398511 ~ 425355 (-) False LOC110509490
XM_036967661.1 mRNA upstream 20024 398511 ~ 425355 (-) False LOC110509490
TU2447450 other upstream 20075 398562 ~ 401555 (-) True LOC110509490
TU2447463 other upstream 47284 425771 ~ 428072 (-) False LOC110509492
TU2447514 other upstream 500432 878919 ~ 937909 (-) True LOC110509502
TU2449041 other upstream 1219534 1598021 ~ 1613209 (-) True G2141258
TU2449079 other upstream 1270812 1649299 ~ 1649731 (-) True G2141289

Expression Profile


TU2447427 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 5.
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TU2447427 Expression in each Bioproject

Bar chart with 19 bars.
TU2447427 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 600.
End of interactive chart.