Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00005303 |
| length | 1593 |
| RNA type | mRNA |
| GC content | 0.46 |
| exon number | 8 |
| gene id | XLOC_002865 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007121.7 |
| NCBI id | CM002894.2 |
| chromosome length | 45420867 |
| location | 32501961 ~ 32524771 (-) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0006629 | lipid metabolic process | biological_process |
| GO:0061959 | response to (R)-carnitine | biological_process |
| GO:0006071 | glycerol metabolic process | biological_process |
| GO:0006651 | diacylglycerol biosynthetic process | biological_process |
| GO:1905897 | regulation of response to endoplasmic reticulum stress | biological_process |
| GO:0055088 | lipid homeostasis | biological_process |
| GO:0019432 | triglyceride biosynthetic process | biological_process |
| GO:0005783 | endoplasmic reticulum | cellular_component |
| GO:0005789 | endoplasmic reticulum membrane | cellular_component |
| GO:0005811 | lipid droplet | cellular_component |
| GO:0016020 | membrane | cellular_component |
| GO:0016021 | integral component of membrane | cellular_component |
| GO:1990578 | perinuclear endoplasmic reticulum membrane | cellular_component |
| GO:0005737 | cytoplasm | cellular_component |
| GO:0016740 | transferase activity | molecular_function |
| GO:0016746 | transferase activity, transferring acyl groups | molecular_function |
| GO:0016747 | transferase activity, transferring acyl groups other than amino-acyl groups | molecular_function |
| GO:0050252 | retinol O-fatty-acyltransferase activity | molecular_function |
| GO:0008374 | O-acyltransferase activity | molecular_function |
| GO:0004144 | diacylglycerol O-acyltransferase activity | molecular_function |
| id | description |
|---|---|
| ZDB-GENE-050913-15 | Predicted to enable diacylglycerol O-acyltransferase activity. Acts upstream of or within lipid homeostasis; regulation of response to endoplasmic reticulum stress; and response to (R)-carnitine. Predicted to be located in lipid droplet and perinuclear endoplasmic reticulum membrane. Predicted to be active in endoplasmic reticulum membrane. Is expressed in male organism. Human ortholog(s) of this gene implicated in non-alcoholic fatty liver disease. Orthologous to several human genes including DGAT2 (diacylglycerol O-acyltransferase 2). |
| ensembl_id | ENSDART00000137608 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00005771 | lncRNA | downstream | 251115 | 32229939 ~ 32250846 (-) | True | XLOC_002863 |
| TCONS_00006079 | lncRNA | downstream | 251190 | 32216413 ~ 32250771 (-) | False | XLOC_002863 |
| TCONS_00006080 | lncRNA | downstream | 262233 | 32229939 ~ 32239728 (-) | False | XLOC_002863 |
| TCONS_00006078 | lncRNA | downstream | 417337 | 32077811 ~ 32084624 (-) | True | XLOC_002862 |
| TCONS_00006077 | lncRNA | downstream | 417840 | 32077811 ~ 32084121 (-) | False | XLOC_002862 |
| TCONS_00006081 | lncRNA | upstream | 60650 | 32584685 ~ 32591462 (-) | True | XLOC_002867 |
| TCONS_00005772 | lncRNA | upstream | 152775 | 32676810 ~ 32678245 (-) | True | XLOC_002870 |
| TCONS_00006082 | lncRNA | upstream | 255845 | 32779880 ~ 32780290 (-) | True | XLOC_002871 |
| TCONS_00006083 | lncRNA | upstream | 370962 | 32894997 ~ 32896944 (-) | True | XLOC_002875 |
| TCONS_00006084 | lncRNA | upstream | 634554 | 33158589 ~ 33164573 (-) | True | XLOC_002877 |
| TCONS_00005301 | mRNA | downstream | 7462 | 32265064 ~ 32494499 (-) | False | XLOC_002864 |
| TCONS_00005300 | mRNA | downstream | 7657 | 32264857 ~ 32494304 (-) | False | XLOC_002864 |
| TCONS_00005302 | mRNA | downstream | 36499 | 32383577 ~ 32465462 (-) | True | XLOC_002864 |
| TCONS_00005299 | mRNA | downstream | 696038 | 31800212 ~ 31805923 (-) | True | XLOC_002861 |
| TCONS_00005298 | mRNA | downstream | 719345 | 31738501 ~ 31782616 (-) | True | XLOC_002860 |
| TCONS_00005305 | mRNA | upstream | 10779 | 32534814 ~ 32558917 (-) | False | XLOC_002866 |
| TCONS_00005306 | mRNA | upstream | 10869 | 32534904 ~ 32558920 (-) | False | XLOC_002866 |
| TCONS_00005307 | mRNA | upstream | 10869 | 32534904 ~ 32610776 (-) | False | XLOC_002866 |
| TCONS_00005310 | mRNA | upstream | 89671 | 32613706 ~ 32639939 (-) | False | XLOC_002868 |
| TCONS_00005311 | mRNA | upstream | 89671 | 32613706 ~ 32639941 (-) | True | XLOC_002868 |
| TCONS_00005293 | other | downstream | 1397207 | 31021356 ~ 31104754 (-) | True | XLOC_002857 |
| TCONS_00005286 | other | downstream | 1970704 | 30531143 ~ 30531257 (-) | True | XLOC_002854 |
| TCONS_00005276 | other | downstream | 2762853 | 29736186 ~ 29739108 (-) | True | XLOC_002847 |
| TCONS_00005273 | other | downstream | 2793779 | 29708068 ~ 29708182 (-) | True | XLOC_002845 |
| TCONS_00005263 | other | downstream | 3578328 | 28923517 ~ 28923633 (-) | True | XLOC_002838 |
| TCONS_00005308 | other | upstream | 18501 | 32542536 ~ 32610769 (-) | False | XLOC_002866 |
| TCONS_00005309 | other | upstream | 43589 | 32567624 ~ 32610694 (-) | True | XLOC_002866 |
| TCONS_00005329 | other | upstream | 852783 | 33376818 ~ 33376941 (-) | True | XLOC_002883 |
| TCONS_00005330 | other | upstream | 852966 | 33377001 ~ 33377086 (-) | True | XLOC_002884 |
| TCONS_00005331 | other | upstream | 853095 | 33377130 ~ 33377214 (-) | True | XLOC_002885 |
