RNA id: TU2464386



Basic Information


Item Value
RNA id TU2464386
length 217
lncRNA type inter_gene
GC content 0.32
exon number 1
gene id G2155387
representative True

Chromosome Information


Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 14580677 ~ 14580893 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


AAAAAACTCAAATGTGTAAACTGGTGAATATAGTGTTTTGGAAATACACTTTTTATACATACAAGTAATTTAGGTCAGATAGGGGAGAGGAGTTGTGTCATAATCTTCAACCAGACCACATTGTTCTGGTCAGTTGTAAATTAATATGCAATCACTAACACATGCACCTTGTGCAATTTATTTATCATTTTCATTTAAATGTCCCTGTAGAAGAAAG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU2464375 lncRNA downstream 9678 14570778 ~ 14570999 (-) True G2155376
TU2464328 lncRNA downstream 52859 14515507 ~ 14527818 (-) True G2155331
TU2464299 lncRNA downstream 105846 14474180 ~ 14474831 (-) True G2155303
TU2464277 lncRNA downstream 153018 14427457 ~ 14427659 (-) True G2155286
TU2464243 lncRNA downstream 183897 14395754 ~ 14396780 (-) True G2155253
TU2464392 lncRNA upstream 3843 14584736 ~ 14584972 (-) True G2155393
TU2464395 lncRNA upstream 5840 14586733 ~ 14587013 (-) True G2155395
TU2464397 lncRNA upstream 6728 14587621 ~ 14587829 (-) True G2155397
TU2465089 lncRNA upstream 179179 14760072 ~ 14806562 (-) True G2156035
TU2465290 lncRNA upstream 457928 15038821 ~ 15087213 (-) True LOC110509702
XM_021590728.2 mRNA downstream 88637 14449447 ~ 14492040 (-) True LOC110509692
XM_021590731.2 mRNA downstream 122577 14449447 ~ 14458100 (-) False LOC110509692
XM_021590730.2 mRNA downstream 123840 14449447 ~ 14456837 (-) False LOC110509692
XM_021590729.2 mRNA downstream 124223 14449447 ~ 14456454 (-) False LOC110509692
XM_021590724.2 mRNA downstream 394403 14184291 ~ 14186274 (-) True LOC110509689
XM_021590735.2 mRNA upstream 8882 14589775 ~ 14660570 (-) False LOC110509694
XM_021590736.2 mRNA upstream 8882 14589775 ~ 14705477 (-) False LOC110509694
XM_021590733.2 mRNA upstream 8882 14589775 ~ 14771641 (-) False LOC110509694
XM_021590734.2 mRNA upstream 8882 14589775 ~ 14771641 (-) True LOC110509694
XM_036967588.1 mRNA upstream 233541 14814434 ~ 14943200 (-) False LOC110509697
TU2464104 other downstream 349671 14227820 ~ 14231006 (-) True G2155120
TU2464046 other downstream 356746 14223121 ~ 14223931 (-) True G2155063
TU2463690 other downstream 523798 14054254 ~ 14056879 (-) True si:ch211-202f5.3
TU2463664 other downstream 550907 14028325 ~ 14029770 (-) True cdc26
TU2463583 other downstream 570510 14000525 ~ 14010167 (-) True G2154637
TU2466897 other upstream 1800297 16381190 ~ 16386045 (-) True G2157715
TU2466925 other upstream 1840784 16421677 ~ 16423421 (-) True G2157743
TU2467297 other upstream 2026732 16607625 ~ 16608006 (-) True G2158088
TU2467320 other upstream 2062788 16643681 ~ 16646597 (-) True G2158111
TU2470823 other upstream 4695375 19276268 ~ 19277006 (-) True LOC110509757

Expression Profile