Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU2471517 |
| length | 474 |
| lncRNA type | inter_gene |
| GC content | 0.36 |
| exon number | 1 |
| gene id | G2161904 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_048593.1 |
| NCBI id | CM023247.2 |
| chromosome length | 47748341 |
| location | 19879833 ~ 19881605 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU2471562 | lncRNA | downstream | 32650 | 19846976 ~ 19847183 (-) | True | G2161945 |
| TU2471499 | lncRNA | downstream | 173199 | 19706401 ~ 19706634 (-) | True | G2161886 |
| TU2471490 | lncRNA | downstream | 184280 | 19695332 ~ 19695553 (-) | True | G2161877 |
| TU2471486 | lncRNA | downstream | 191795 | 19687745 ~ 19688038 (-) | True | G2161873 |
| TU2471483 | lncRNA | downstream | 195777 | 19683826 ~ 19684056 (-) | True | G2161870 |
| TU2471523 | lncRNA | upstream | 1762 | 19882068 ~ 19882595 (-) | True | G2161908 |
| TU2471586 | lncRNA | upstream | 59834 | 19940140 ~ 19940386 (-) | True | G2161969 |
| TU2471587 | lncRNA | upstream | 61300 | 19941606 ~ 19941943 (-) | True | G2161970 |
| TU2471589 | lncRNA | upstream | 64499 | 19944805 ~ 19945080 (-) | True | G2161972 |
| TU2471595 | lncRNA | upstream | 72005 | 19952311 ~ 19952624 (-) | True | G2161975 |
| XM_021590873.2 | mRNA | downstream | 39149 | 19837240 ~ 19840684 (-) | False | LOC110509775 |
| XR_002471482.2 | mRNA | downstream | 39154 | 19837235 ~ 19840679 (-) | False | LOC110509775 |
| XR_005040396.1 | mRNA | downstream | 39154 | 19838055 ~ 19840679 (-) | True | LOC110509775 |
| XM_036967570.1 | mRNA | downstream | 39668 | 19837240 ~ 19840165 (-) | False | LOC110509775 |
| XM_021590869.2 | mRNA | downstream | 44564 | 19807260 ~ 19835269 (-) | True | LOC110509773 |
| NM_001124393.2 | mRNA | upstream | 2456 | 19882762 ~ 19903442 (-) | False | traf2 |
| XM_021590205.2 | mRNA | upstream | 2456 | 19882762 ~ 19905873 (-) | True | traf2 |
| XM_036968090.1 | mRNA | upstream | 66261 | 19946567 ~ 19950623 (-) | False | LOC110509780 |
| XM_036968089.1 | mRNA | upstream | 66261 | 19946567 ~ 19950624 (-) | True | LOC110509780 |
| XM_021590891.2 | mRNA | upstream | 142822 | 20023128 ~ 20025908 (-) | True | LOC110509785 |
| TU2470823 | other | downstream | 602827 | 19276268 ~ 19277006 (-) | True | LOC110509757 |
| TU2467320 | other | downstream | 3233236 | 16643681 ~ 16646597 (-) | True | G2158111 |
| TU2467297 | other | downstream | 3271827 | 16607625 ~ 16608006 (-) | True | G2158088 |
| TU2466925 | other | downstream | 3456412 | 16421677 ~ 16423421 (-) | True | G2157743 |
| TU2466897 | other | downstream | 3493788 | 16381190 ~ 16386045 (-) | True | G2157715 |
| TU2471632 | other | upstream | 104239 | 19984545 ~ 19984779 (-) | True | G2162005 |
| TU2471779 | other | upstream | 202839 | 20083145 ~ 20083618 (-) | True | G2162127 |
| TU2471773 | other | upstream | 207924 | 20088230 ~ 20093660 (-) | True | LOC110509788 |
| TU2472094 | other | upstream | 428883 | 20309189 ~ 20309802 (-) | False | G2162405 |
| TU2472087 | other | upstream | 428939 | 20309245 ~ 20309802 (-) | True | G2162405 |
