RNA id: TU2490795



Basic Information


Item Value
RNA id TU2490795
length 249
lncRNA type inter_gene
GC content 0.37
exon number 1
gene id G2179167
representative True

Chromosome Information


Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 35387487 ~ 35387735 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


CATCATATCCTTGACAAAGTGTTTGTATCTTTGTGTTGTGTCAAAATATGACTGAATAACTTAAATGTAAGTTGGATGGAATCATGGAAACTTTTTGGACTATTCAACAAAATGTGTTACcaacctttctctctcctgtggaTTTTATCATCTCCTCAATGATACATCCTCACTATAGTCCAAGTAACATCTTGTAAAAGCCACTGTGAAGAGGGGTCCTTTCTATCCTTGGATGACAGCCTTTCCCAC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU2490790 lncRNA downstream 12470 35374526 ~ 35375017 (-) True G2179162
TU2490786 lncRNA downstream 18505 35368691 ~ 35368982 (-) True G2179158
TU2490784 lncRNA downstream 22833 35364365 ~ 35364654 (-) True G2179156
TU2490783 lncRNA downstream 23408 35363838 ~ 35364079 (-) True G2179155
TU2490778 lncRNA downstream 40955 35346220 ~ 35346532 (-) True G2179150
TU2490797 lncRNA upstream 880 35388615 ~ 35389248 (-) True G2179169
TU2490808 lncRNA upstream 15705 35403440 ~ 35468274 (-) True G2179178
TU2490835 lncRNA upstream 84893 35472628 ~ 35473365 (-) True G2179204
TU2490845 lncRNA upstream 93320 35481055 ~ 35483881 (-) True G2179211
TU2490762 lncRNA upstream 116615 35504350 ~ 35506878 (-) True G2179135
XM_036967716.1 mRNA downstream 18925 35349365 ~ 35368562 (-) True LOC118945291
XM_036967521.1 mRNA downstream 97949 35003916 ~ 35289538 (-) False LOC110510172
XM_036967517.1 mRNA downstream 97950 35003916 ~ 35289537 (-) False LOC110510172
XM_021591545.2 mRNA upstream 11601 35399336 ~ 35421810 (-) False LOC110510176
XM_021591544.2 mRNA upstream 11601 35399336 ~ 35421812 (-) True LOC110510176
XM_036968005.1 mRNA upstream 34231 35421966 ~ 35454523 (-) False LOC110510173
XM_036968004.1 mRNA upstream 34231 35421966 ~ 35454525 (-) True LOC110510173
XM_021591553.2 mRNA upstream 107550 35495285 ~ 35505716 (-) True ik
TU2489908 other downstream 578184 34803191 ~ 34809303 (-) False G2178372
TU2489911 other downstream 578184 34803191 ~ 34809303 (-) True G2178372
TU2489664 other downstream 1045674 34338911 ~ 34341813 (-) True LOC110510135
TU2489480 other downstream 1240168 34121482 ~ 34147319 (-) False G2177991
TU2489160 other downstream 1875161 33511296 ~ 33512326 (-) True G2177695
TU2491621 other upstream 574249 35961984 ~ 35962832 (-) True G2179862
TU2491931 other upstream 1116738 36504473 ~ 36512189 (-) False LOC110510209
TU2491944 other upstream 1118805 36506540 ~ 36507120 (-) True G2180120
TU2491922 other upstream 1146362 36534097 ~ 36596306 (-) False LOC110510209
TU2491926 other upstream 1146362 36534097 ~ 36596373 (-) True LOC110510209

Expression Profile