RNA id: TU2503091



Basic Information


Item Value
RNA id TU2503091
length 364
RNA type TUCP
GC content 0.46
exon number 2
gene id G2188877
representative True

Chromosome Information


Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 46081386 ~ 46084784 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


tataaatgcacctgcactgtgatagtctcagaggtccgtcaaaagcgcagagagcatcatgaagaacaaggaacacaccaggcaggtccgagatactgttgtgaagaagtttaaagccggatttggatacaaaaatatttcccaagctttaaacatcccaaggagcactgtgcaagcgataatattgaaatggaaggagtatcagaccactgcaaatctaccaagacctggccgtccctctaaactttcagctcatacaaggagaggactgatcagagatgcagccaagaggcccatgatcactctggatgaactgcagagatctacagctgaggtgggagactctgtccataggacaacaatc

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU2503086 lncRNA downstream 7676 46073463 ~ 46073710 (-) True G2188872
TU2502701 lncRNA downstream 9097 46072065 ~ 46072289 (-) True G2188584
TU2502698 lncRNA downstream 15262 46063616 ~ 46066124 (-) True G2188581
TU2502675 lncRNA downstream 17808 46063252 ~ 46063578 (-) True G2188577
TU2502637 lncRNA downstream 19446 45979313 ~ 46061940 (-) True LOC110510923
TU2503102 lncRNA upstream 8353 46093137 ~ 46094344 (-) True G2188883
TU2503103 lncRNA upstream 22194 46106978 ~ 46110599 (-) True G2188884
TU2503106 lncRNA upstream 28531 46113315 ~ 46113676 (-) True G2188886
TU2503108 lncRNA upstream 31211 46115995 ~ 46116335 (-) True G2188888
TU2503125 lncRNA upstream 33287 46118071 ~ 46118378 (-) True G2188902
XM_036968183.1 mRNA downstream 301115 45768732 ~ 45780271 (-) True si:ch1073-15f19.2
XM_036968220.1 mRNA downstream 320815 45743616 ~ 45760571 (-) False LOC118945350
XM_036967596.1 mRNA downstream 391797 45668257 ~ 45689589 (-) True smpd1
XM_036967251.1 mRNA downstream 585951 45467311 ~ 45495435 (-) True proser1
XM_036967252.1 mRNA downstream 585952 45467311 ~ 45495434 (-) False proser1
XM_036967732.1 mRNA upstream 133779 46218563 ~ 46294863 (-) True grm5a
XM_036967918.1 mRNA upstream 240417 46325201 ~ 46353650 (-) True tmem135
XR_005040422.1 mRNA upstream 333209 46417993 ~ 46418609 (-) True LOC118945303
XM_036968046.1 mRNA upstream 482647 46567431 ~ 46568798 (-) True LOC118945322
XM_021591693.2 mRNA upstream 589127 46673911 ~ 46683741 (-) True si:dkey-175g6.2
TU2502464 other downstream 277199 45802955 ~ 45804187 (-) True G2188420
TU2502471 other downstream 333349 45744198 ~ 45748037 (-) True LOC118945350
TU2502242 other downstream 678025 45309286 ~ 45403361 (-) False G2188249
TU2503081 other upstream 58535 46143319 ~ 46157806 (-) False G2188868
TU2503082 other upstream 71345 46156129 ~ 46157806 (-) True G2188868
TU2503395 other upstream 549454 46634238 ~ 46636168 (-) False G2189115
TU2503400 other upstream 549454 46634238 ~ 46636168 (-) True G2189115
TU2503500 other upstream 684899 46769683 ~ 46769961 (-) True G2189204

Expression Profile