RNA id: TU2504394



Basic Information


Item Value
RNA id TU2504394
length 255
lncRNA type intronic
GC content 0.48
exon number 2
gene id G2189796
representative True

Chromosome Information


Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 47169231 ~ 47170487 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


gtgttcccctggctatctgtaatgatgtctgagtgttggagtgttcccctggctatctgtaatgatgtctgagtgttggagtgttcccctggctatctgtaatgatgtctgagtgttggagtgttcccctggctatctgtaatgatgtctgagtgttggagtgttcccctggctatctgtaatgatgtctgagtgttggagtgttcccctggctatctgtaatgatgtctgagtgttggagtgttcccctggcta

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU2504389 lncRNA downstream 1696 47166265 ~ 47167535 (-) True G2189795
TU2504388 lncRNA downstream 2720 47165799 ~ 47166511 (-) False G2189795
TU2504376 lncRNA downstream 7769 47160402 ~ 47161462 (-) True G2189791
TU2504375 lncRNA downstream 9277 47159530 ~ 47159954 (-) True G2189790
TU2504374 lncRNA downstream 9724 47159148 ~ 47159507 (-) True G2189789
TU2504396 lncRNA upstream 1577 47172064 ~ 47172293 (-) True G2189798
TU2504397 lncRNA upstream 2230 47172717 ~ 47173046 (-) True G2189799
TU2504402 lncRNA upstream 6692 47177179 ~ 47178010 (-) True G2189801
TU2504405 lncRNA upstream 14825 47185312 ~ 47187450 (-) False G2189802
TU2504404 lncRNA upstream 16662 47187149 ~ 47187450 (-) True G2189802
XM_036967734.1 mRNA downstream 68989 47091773 ~ 47100242 (-) True ddias
XR_005040424.1 mRNA downstream 93769 47071685 ~ 47075462 (-) False LOC118945304
XM_036968054.1 mRNA upstream 17062 47187549 ~ 47211233 (-) False birc2
XM_036968050.1 mRNA upstream 17062 47187549 ~ 47211692 (-) False birc2
XM_036968052.1 mRNA upstream 17062 47187549 ~ 47211692 (-) False birc2
XM_036968049.1 mRNA upstream 17062 47187549 ~ 47223889 (-) False birc2
XM_036968047.1 mRNA upstream 17062 47187549 ~ 47224194 (-) False birc2
TU2503500 other downstream 399270 46769683 ~ 46769961 (-) True G2189204
TU2503395 other downstream 533063 46634238 ~ 46636168 (-) False G2189115
TU2503400 other downstream 533063 46634238 ~ 46636168 (-) True G2189115
TU2503081 other downstream 1011425 46143319 ~ 46157806 (-) False G2188868
TU2504417 other upstream 72562 47243049 ~ 47270482 (-) False G2189814
TU2504421 other upstream 72562 47243049 ~ 47270482 (-) False G2189814
TU2504422 other upstream 72562 47243049 ~ 47270482 (-) False G2189814
TU2504387 other upstream 115497 47285984 ~ 47287003 (-) True G2189794
TU2504517 other upstream 249447 47419934 ~ 47428596 (-) True G2189898

Expression Profile