RNA id: trnat-ugu-41


Basic Information

Item Value
RNA id trnat-ugu-41
length 72
RNA type mRNA
GC content 0.56
exon number 1
gene id trnat-ugu-41
representative True

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 78903 ~ 78974 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

ggcatggtggccaagcggtaaggtgtcggtcttgtaaaccgaagagcatgggttcaaatcccatccacGCCT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU2504815 lncRNA downstream 33683 112657 ~ 116419 (+) True G2190074
TU2504818 lncRNA downstream 64816 143790 ~ 147976 (+) True G2190077
TU2504820 lncRNA downstream 71536 150510 ~ 153123 (+) True G2190079
TU2504821 lncRNA downstream 91914 170888 ~ 181982 (+) True G2190080
TU2504768 lncRNA downstream 282842 361816 ~ 362627 (+) True G2190050
XM_036968555.1 mRNA downstream 10344 89318 ~ 359262 (+) True LOC110522685
XM_036969199.1 mRNA downstream 284469 363443 ~ 376929 (+) False cfap161
XM_036969198.1 mRNA downstream 284471 363445 ~ 376929 (+) False cfap161
XM_036969201.1 mRNA downstream 284475 363449 ~ 384254 (+) False cfap161
XM_036969200.1 mRNA downstream 284476 363450 ~ 384257 (+) True cfap161
TU2504769 other downstream 281957 360931 ~ 362627 (+) False G2190050
TU2504955 other downstream 444560 523534 ~ 527466 (+) False G2190199
TU2505236 other downstream 530352 609326 ~ 616624 (+) False LOC110521136
TU2505239 other downstream 530352 609326 ~ 616624 (+) False LOC110521136
TU2505423 other downstream 803966 882940 ~ 884097 (+) False G2190529