Item | Value |
---|---|
RNA id | TCONS_00005343 |
length | 855 |
RNA type | processed_transcript |
GC content | 0.35 |
exon number | 2 |
gene id | XLOC_002893 |
representative | True |
Item | Value |
---|---|
chromosome id | NC_007121.7 |
NCBI id | CM002894.2 |
chromosome length | 45420867 |
location | 34021368 ~ 34033680 (-) |
genome version | GRCz11_2017_zebrafish_Genome |
species | zebrafish (Danio rerio) |
id | name | namespace |
---|---|---|
GO:0006260 | DNA replication | biological_process |
GO:0006261 | DNA-dependent DNA replication | biological_process |
GO:0006281 | DNA repair | biological_process |
GO:0005634 | nucleus | cellular_component |
GO:0005663 | DNA replication factor C complex | cellular_component |
GO:0003677 | DNA binding | molecular_function |
GO:0003689 | DNA clamp loader activity | molecular_function |
id | description |
---|---|
ZDB-GENE-020809-3 | Predicted to enable DNA binding activity. Predicted to contribute to DNA clamp loader activity. Predicted to be involved in DNA repair and DNA-dependent DNA replication. Predicted to act upstream of or within DNA replication. Predicted to be part of DNA replication factor C complex. Predicted to be active in nucleus. Is expressed in alar plate midbrain region; head; immature eye; optic tectum; and pectoral fin musculature. Orthologous to human RFC3 (replication factor C subunit 3). |
ensembl_id | ENSDART00000132398 |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TCONS_00005339 | lncRNA | downstream | 151919 | 33876131 ~ 33880364 (-) | True | XLOC_002891 |
TCONS_00006085 | lncRNA | downstream | 367494 | 33663165 ~ 33664789 (-) | True | XLOC_002890 |
TCONS_00005338 | lncRNA | downstream | 413341 | 33617624 ~ 33618942 (-) | True | XLOC_002889 |
TCONS_00006084 | lncRNA | downstream | 867710 | 33158589 ~ 33164573 (-) | True | XLOC_002877 |
TCONS_00006083 | lncRNA | downstream | 1135339 | 32894997 ~ 32896944 (-) | True | XLOC_002875 |
TCONS_00006086 | lncRNA | upstream | 163361 | 34196782 ~ 34198566 (-) | True | XLOC_002900 |
TCONS_00006087 | lncRNA | upstream | 718889 | 34752310 ~ 34772155 (-) | False | XLOC_002903 |
TCONS_00005364 | lncRNA | upstream | 734435 | 34767856 ~ 34772211 (-) | False | XLOC_002903 |
TCONS_00006088 | lncRNA | upstream | 734555 | 34767976 ~ 34772211 (-) | False | XLOC_002903 |
TCONS_00005773 | lncRNA | upstream | 734590 | 34768011 ~ 34768673 (-) | False | XLOC_002903 |
TCONS_00005340 | mRNA | downstream | 30098 | 33999869 ~ 34002185 (-) | True | XLOC_002892 |
TCONS_00005336 | mRNA | downstream | 410544 | 33614377 ~ 33621739 (-) | False | XLOC_002889 |
TCONS_00005337 | mRNA | downstream | 410544 | 33617491 ~ 33621739 (-) | False | XLOC_002889 |
TCONS_00005334 | mRNA | downstream | 443973 | 33580285 ~ 33588310 (-) | False | XLOC_002888 |
TCONS_00005335 | mRNA | downstream | 444177 | 33580363 ~ 33588106 (-) | True | XLOC_002888 |
TCONS_00005344 | mRNA | upstream | 10140 | 34043561 ~ 34046757 (-) | True | XLOC_002894 |
TCONS_00005345 | mRNA | upstream | 25586 | 34059007 ~ 34067286 (-) | True | XLOC_002895 |
TCONS_00005346 | mRNA | upstream | 53170 | 34086591 ~ 34089779 (-) | False | XLOC_002896 |
TCONS_00005347 | mRNA | upstream | 53172 | 34086593 ~ 34107919 (-) | False | XLOC_002896 |
TCONS_00005348 | mRNA | upstream | 71312 | 34104733 ~ 34107919 (-) | True | XLOC_002896 |
TCONS_00005331 | other | downstream | 655069 | 33377130 ~ 33377214 (-) | True | XLOC_002885 |
TCONS_00005330 | other | downstream | 655197 | 33377001 ~ 33377086 (-) | True | XLOC_002884 |
TCONS_00005329 | other | downstream | 655342 | 33376818 ~ 33376941 (-) | True | XLOC_002883 |
TCONS_00005308 | other | downstream | 1421514 | 32542536 ~ 32610769 (-) | False | XLOC_002866 |
TCONS_00005309 | other | downstream | 1421589 | 32567624 ~ 32610694 (-) | True | XLOC_002866 |
TCONS_00005358 | other | upstream | 293841 | 34327262 ~ 34327394 (-) | True | XLOC_002902 |
TCONS_00005381 | other | upstream | 951197 | 34984618 ~ 34992414 (-) | False | XLOC_002907 |
TCONS_00005403 | other | upstream | 1336416 | 35369837 ~ 35387242 (-) | True | XLOC_002918 |
TCONS_00005406 | other | upstream | 1586912 | 35620333 ~ 35620449 (-) | True | XLOC_002922 |
TCONS_00005408 | other | upstream | 1620824 | 35654245 ~ 35654354 (-) | True | XLOC_002923 |