RNA id: TCONS_00005358


Basic Information

Item Value
RNA id TCONS_00005358
length 133
RNA type rRNA
GC content 0.53
exon number 1
gene id XLOC_002902
representative True

Chromosome Information

Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 34327262 ~ 34327394 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

TCAGGCATTAAACATAGACGACCCATTGGGGTTCTCCTAAGCGGACTTGATTGCAGGGTGGACTCAATTTCTTACCACACCAGcacagtacctggatgggagaccgcatgggaacactaggttgctgccggac

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000170530

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00006086 lncRNA downstream 128696 34196782 ~ 34198566 (-) True XLOC_002900
TCONS_00005339 lncRNA downstream 446898 33876131 ~ 33880364 (-) True XLOC_002891
TCONS_00006085 lncRNA downstream 662473 33663165 ~ 33664789 (-) True XLOC_002890
TCONS_00005338 lncRNA downstream 708320 33617624 ~ 33618942 (-) True XLOC_002889
TCONS_00006084 lncRNA downstream 1162689 33158589 ~ 33164573 (-) True XLOC_002877
TCONS_00006087 lncRNA upstream 424916 34752310 ~ 34772155 (-) False XLOC_002903
TCONS_00005364 lncRNA upstream 440462 34767856 ~ 34772211 (-) False XLOC_002903
TCONS_00006088 lncRNA upstream 440582 34767976 ~ 34772211 (-) False XLOC_002903
TCONS_00005773 lncRNA upstream 440617 34768011 ~ 34768673 (-) False XLOC_002903
TCONS_00006089 lncRNA upstream 542895 34870289 ~ 34871737 (-) True XLOC_002903
TCONS_00005356 mRNA downstream 83993 34220492 ~ 34243269 (-) False XLOC_002901
TCONS_00005357 mRNA downstream 83993 34240084 ~ 34243269 (-) True XLOC_002901
TCONS_00005354 mRNA downstream 103695 34171674 ~ 34223567 (-) True XLOC_002898
TCONS_00005355 mRNA downstream 126512 34187231 ~ 34200750 (-) True XLOC_002899
TCONS_00005353 mRNA downstream 152404 34171674 ~ 34174858 (-) False XLOC_002898
TCONS_00005359 mRNA upstream 409928 34737322 ~ 34741738 (-) False XLOC_002903
TCONS_00005360 mRNA upstream 409928 34737322 ~ 34772211 (-) False XLOC_002903
TCONS_00005361 mRNA upstream 409928 34737322 ~ 34871737 (-) False XLOC_002903
TCONS_00005362 mRNA upstream 410736 34738130 ~ 34870667 (-) False XLOC_002903
TCONS_00005363 mRNA upstream 417078 34744472 ~ 34772213 (-) False XLOC_002903
TCONS_00005343 other downstream 293841 34032283 ~ 34033421 (-) True XLOC_002893
TCONS_00005331 other downstream 950048 33377130 ~ 33377214 (-) True XLOC_002885
TCONS_00005330 other downstream 950176 33377001 ~ 33377086 (-) True XLOC_002884
TCONS_00005329 other downstream 950321 33376818 ~ 33376941 (-) True XLOC_002883
TCONS_00005308 other downstream 1716493 32542536 ~ 32610769 (-) False XLOC_002866
TCONS_00005381 other upstream 657224 34984618 ~ 34992414 (-) False XLOC_002907
TCONS_00005403 other upstream 1042443 35369837 ~ 35387242 (-) True XLOC_002918
TCONS_00005406 other upstream 1292939 35620333 ~ 35620449 (-) True XLOC_002922
TCONS_00005408 other upstream 1326851 35654245 ~ 35654354 (-) True XLOC_002923
TCONS_00005410 other upstream 1835785 36163179 ~ 36163294 (-) True XLOC_002926