RNA id: TU2504815



Basic Information


Item Value
RNA id TU2504815
length 261
lncRNA type intronic
GC content 0.50
exon number 2
gene id G2190074
representative True

Chromosome Information


Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 112657 ~ 116419 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


GTTGTGTGTCATCTACTCGTCAGCTATTTTATGTCtaagctactcgtcagctgctcgtcagctaggttgtgtgtcagctgctcgtcagctaggttgtgtgtcagctgctcgtcagttaggttgtgtgtcagctgttcgtcagctaggttgtgtcagctattcgtcagatgctcgtcagctcggttgtgtgtcagctactcgtcagctaggttgtgtgtcagctactcatcagatgctcatcagctaggttgtgtttcagct

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU2504818 lncRNA downstream 27371 143790 ~ 147976 (+) True G2190077
TU2504820 lncRNA downstream 34091 150510 ~ 153123 (+) True G2190079
TU2504821 lncRNA downstream 54469 170888 ~ 181982 (+) True G2190080
TU2504768 lncRNA downstream 245397 361816 ~ 362627 (+) True G2190050
TU2504949 lncRNA downstream 418402 534821 ~ 542502 (+) True G2190199
trnat-ugu-41 mRNA upstream 33683 78903 ~ 78974 (+) True trnat-ugu-41
XM_036969199.1 mRNA downstream 247024 363443 ~ 376929 (+) False cfap161
XM_036969198.1 mRNA downstream 247026 363445 ~ 376929 (+) False cfap161
XM_036969201.1 mRNA downstream 247030 363449 ~ 384254 (+) False cfap161
XM_036969200.1 mRNA downstream 247031 363450 ~ 384257 (+) True cfap161
XR_005040872.1 mRNA downstream 369453 485872 ~ 550049 (+) False bnip2
TU2504769 other downstream 244512 360931 ~ 362627 (+) False G2190050
TU2504955 other downstream 407115 523534 ~ 527466 (+) False G2190199
TU2505236 other downstream 492907 609326 ~ 616624 (+) False LOC110521136
TU2505239 other downstream 492907 609326 ~ 616624 (+) False LOC110521136
TU2505423 other downstream 766521 882940 ~ 884097 (+) False G2190529

Expression Profile